Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0624 ATGGGAGGGCATATGAGCAAGAAGTCTGCTGAGACTTCCTCAGCAATCACCATCAATCCCAACTTGCATTATTCAACTGAGCTAAGTTCATACGAGGCCGCGTGCCGGGTTGATACGGATCTTCAGTCCTTCGACACCACGCTGCAAGCCCGCACCAGTCATGTTATCAACACCCTGGCCGTGGGAGAAGGTCTCCAGCATGATATTTGCTGCTACTTTTGCGGCCCTTCTCTCCCACTGGGCACAATGGGAAAGTGGATTGATTCTCTATTGAAGAACTATGAGAACGCCCTGAAAGGGCAGAAGGAGGTGATAAGCTCAATGCAGGTAGGCACCTATGTTGCTATTAAGGACTTGGACACCATTCGGGTTCTCATCGATCGGCTGGAAATCGAGATTGAGTCGCTCTTGCAGACCACGGACTACGTGATTAAGGAGGAGGCTGTGAAGTTTGGGATTGAGGAGATAAAGAAGAAGCTGGGGGTGTTCATGAAGAATGTTGATGATTTGGGGGTGCAAGCGGATATGTGCAGCCGCGATATTAGGAGGGCAAGGACTGTTGTTCTTCAGAGGATCATAAAACAGCCCAACAAGTGA 597 0.4958 MGGHMSKKSAETSSAITINPNLHYSTELSSYEAACRVDTDLQSFDTTLQARTSHVINTLAVGEGLQHDICCYFCGPSLPLGTMGKWIDSLLKNYENALKGQKEVISSMQVGTYVAIKDLDTIRVLIDRLEIEIESLLQTTDYVIKEEAVKFGIEEIKKKLGVFMKNVDDLGVQADMCSRDIRRARTVVLQRIIKQPNK* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0624 198 Pfam Protein of unknown function (DUF677) 75 192 IPR007749 -
Vvi3g0624 198 Coils Coil 119 139 - -
Vvi3g0624 198 PANTHER UPF0496 PROTEIN 3-RELATED 79 194 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0624 Vvi-Chr3 5353630 5354751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0624 - - vvi:100253828 237.269