Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0619 ATGTACACTCTAAAACCCTCATTCTCCAAAACCCTTTTCCTCAAATCACCTCTTCTTCGATCCTCCTTCAAACCCCAATTCTTTCCCTACACTACACAAATTTCCAGTCCCTGCAGTAGCACACCTCTCTCTTTCAGCATCACCTGCAAGCTCAAAACCTCCGAGGATGGAAAGAGCAGCAAGAGTCTGGCCAAGAAGATTGTTCTGTCGGAGGGAGCACCGGCGGTGTCCGAGGACGGCGCCGGAAATGGGGAAGCTCAGCCGAAGCCGGCGAGTAAGGGGGGTGGCGGTGGTGGGGGTTTTGGGGGGTTGGTGAAGAGGTTCCCCAGAAAGGTTCTGTCTCGTCTTTCTAATTTGCCTTTGGCTATTGGGGAGATGTTCACTGTTGCAGCTTTAATGGCTTTAGGTACTGCCATTGATCAAGGAGAGGCTCCAGATTACTATTTTCAAAAATTCCCTGAAGATAATCCAGTCTTGGGATTCTTCACTTGGAGATGGGTTCTCACCCTTGGGTTCGACCACATGTTCTCATCTCCCATCTTCCTGGGAATGTTGGCTCTCCTGGCCACATCACTCATGGCCTGTACCTACACAACACAAATCCCCCTGGTTAAGGTTGCAAGAAGATGGAATTTCTTGCACTCTGCTGAAGCCATTCGCAAGCAGGAATTTTCAGAGTCTCTGCCCAAAGCATCAGTTCGAGATTTGGGTGTTGTTCTGATGGGAGCTGGATATGAGGTATTCTTGAAGGGACCATCTTTATATGCCTTCAAGGGACTGGCAGGCAGGTTTGCCCCTATTGGAGTTCATTTAGCAATGCTGCTGATAATGGTAGGTGGAACTCTGAGTGCTACTGGGAGCTTTAGAGGTTCCGTCACAGTTCCACAGGGATTGAATTTTGTTATGGGAGATGTGCTAAGCCCAAGTGGGTTTCTTTCTACACCAACAAAAGCTTTTGATACTGAGGTTCATGTCAACAGATTTTACATGGACTACTATGACAGTGGGGAGGTATTGCAGTTTCACACTGATCTTTCGCTGTTTGACCTTAATGGAAAAGAGGTGATGAGGAAAACAATAAGTGTAAATGACCCTTTAAGATTTGATGGGATCACTATATACCAGACTGATTGGAGTTTTTCGGCATTACAAATACGTAAGGATGATGAAGGACCTTTCAATTTGGCTATGGCACCTTTAAAGCTCAATGGAGATAAGAAGCTTTTTGGGACCTTTTTACCAGTTGGAGATTCTGATTCTCCTAATGTTAAGGGAATATCAATGCTTGCCCGTGATCTACAGTCAATTGTCTTATATGATAAAGAAGGAAAATTTGCTGGAGTTAGACGACCTAACTCTAATCTTCCAATTGACATTGACGGCACAAGGATTGTTATTGAAGATGCAATAGGTAGTAGTGGCCTCGACTTGAAGACTGATCCAGGGGTTCCGATTGTGTATGCTGGTTTTGGTGCTCTGATGCTCACAACTTGCATCAGTTACTTATCTCATACACAGATATGGGCCTTACAAGATGGAACTACAGTAGTCATTGGAGGAAAGACAAACCGGGCAAAGCTTGAATTTCCTGATGAAATGAATCAATTGCTTGATCGGGTCCCAGAACTAGTTGAATCATCACTTTCTAAGCAATCTGATGCCATTAGTGGCTAG 1674 0.4504 MYTLKPSFSKTLFLKSPLLRSSFKPQFFPYTTQISSPCSSTPLSFSITCKLKTSEDGKSSKSLAKKIVLSEGAPAVSEDGAGNGEAQPKPASKGGGGGGGFGGLVKRFPRKVLSRLSNLPLAIGEMFTVAALMALGTAIDQGEAPDYYFQKFPEDNPVLGFFTWRWVLTLGFDHMFSSPIFLGMLALLATSLMACTYTTQIPLVKVARRWNFLHSAEAIRKQEFSESLPKASVRDLGVVLMGAGYEVFLKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLSPSGFLSTPTKAFDTEVHVNRFYMDYYDSGEVLQFHTDLSLFDLNGKEVMRKTISVNDPLRFDGITIYQTDWSFSALQIRKDDEGPFNLAMAPLKLNGDKKLFGTFLPVGDSDSPNVKGISMLARDLQSIVLYDKEGKFAGVRRPNSNLPIDIDGTRIVIEDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCISYLSHTQIWALQDGTTVVIGGKTNRAKLEFPDEMNQLLDRVPELVESSLSKQSDAISG* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0619 557 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 109 538 IPR023494 -
Vvi3g0619 557 MobiDBLite consensus disorder prediction 75 98 - -
Vvi3g0619 557 Pfam ResB-like family 121 395 IPR007816 -
Vvi3g0619 557 Pfam ResB-like family 425 533 IPR007816 -
Vvi3g0619 557 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 60 547 IPR023494 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0619 26 553 Miscellaneous Gene Families AT1G49380 72.180 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0619 K07399 - vvi:100265915 1091.26