Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0614 ATGGATCAAAATCTTCAGTACCATGATATGGGACAATTCAGAAGCTCTGTTGAAGCAAAGAAGCAGTCCCCAAGAGCTGAGGTTCAGAATTCTTTGAAGCAAGAGATTCTACAGCTTCAGAAGGGATTACAAGACCAATTTCTGGTTCGACGTGCATTAGAGAAGGCATTGGGTTATAGGTCTTTCTCCCATGATACCATAAATGCAAACTCAGTGCCCAAGCCTGCTGAGAATCTGATCAAGGAAATTGCGGTTTTGGAGCTGGAAGTTGTCTACCTGGAACAATATCTTCTCTCATTGTACCGGAAAACATTTGATCGACAAATTTCATCCGTTTCTACCGTGGATGATAGAATAAAGTCAACTTCAACTGCCCATAGAAGGATGTTTCAAGAAGTTTCTGGAGATAAGATCATATCAAAGACTGAAAATTCAGTTATTCACTCTAGCCATCTTTTGTCACCCCGAGATTCAATTGACAATCCACCAAAGGAATGCAATGACATTTGGGGACCTCATAAGTTGTTGGATTCTAGCATTCATCGCAGCCATTCCTCCCTATCTCAACGTTCAACTTGTCCGATTAGAACTTCTCCTTCAATGCAAACTCTAGCCAAAGCTGTAGACTCGTACCATTCTCTACCTTTGTCCATGCTGGAGCGTGCTGACAATGCTCCTTCAAATGCAATCAGCCTGGCAGAGCATCTTGGTACCAACATTTGTGATCATGATCCAATGACACCAAACCGGCTCTCTGAGGAGATGATTAAGTGCATCTCAGCCATATATTGCAGACTTGCAGACCCCCCTTTGTCCAATAATGATTATCCTTCCTCTCCTATTTCCTCCCCATTATCAATGAATGAGTTTTCTCCGCGAGGCCAGTGTGATATGTGGAGCCCACAATGCCGTAAAAATTCATCTTTCAATTCAGTGTTGGATAACCCTTTCCACATTGAAGAGTCGAAGGAATTCAGTGGACCATACTGCACAATGGTGGAAGTGAAATGGATTTGTAGAGACAGTAAAAAGTTAAGAGACATTGGGCCCATGCTACAAAAATTTCGGTCACTTGTTTATCAGTTGGAACAAGTTGATCCTAGAAAGATGAGACATGAGGAGAAGCTAGCTTTCTGGATTAATGTACACAATGCACTAATAATGCATGCATTCTTGGTTTATGGGATTCCACAAAATAATCTAAAGAGAATTTCTTTACTTCTCAAGGCTGCATATAATGTGGGAGGTCACACCATAAGCGTAGACATGATACAGAATTCTATTTTAGGATGCAGATTGGCTCGCCCTGGACAATGGCTCTGGTCGTTGTTTTCATCAACAAAGAAATTCAAGGCTCGAGATGAGAGGAAAGCATATGGCATTGAGCACCCTGAGCCTCTCCTGCATTTTGCACTCTGTTCAGGAAGCCATTCTGATCCTTCGGCCCGCATATACACACCAAAGAACGTGTTCCAGGAGTTGGAAGTTGCAAAAGAAGAGTACATCCGAACCGCCTTCAGGTTACACAAGGGACAGAAAGTTCTTCTACCAAAGCTTGTGGAGTCTTTTTCCAAGGAATCTGGTTTGTGTCAAGCTGATCTGGTGGAGATCATTGAGCATTGTATGCCTAACAGCTTGGGAAAGGGCATCCACTGGGGTCAGCATGGAAAATTTTGGAAGAGCATAGAATGGACCCCTCACAACTTCGCATTCCGTTATCTGCTTTCAAGAGAGCTACCAAAGTGA 1746 0.4284 MDQNLQYHDMGQFRSSVEAKKQSPRAEVQNSLKQEILQLQKGLQDQFLVRRALEKALGYRSFSHDTINANSVPKPAENLIKEIAVLELEVVYLEQYLLSLYRKTFDRQISSVSTVDDRIKSTSTAHRRMFQEVSGDKIISKTENSVIHSSHLLSPRDSIDNPPKECNDIWGPHKLLDSSIHRSHSSLSQRSTCPIRTSPSMQTLAKAVDSYHSLPLSMLERADNAPSNAISLAEHLGTNICDHDPMTPNRLSEEMIKCISAIYCRLADPPLSNNDYPSSPISSPLSMNEFSPRGQCDMWSPQCRKNSSFNSVLDNPFHIEESKEFSGPYCTMVEVKWICRDSKKLRDIGPMLQKFRSLVYQLEQVDPRKMRHEEKLAFWINVHNALIMHAFLVYGIPQNNLKRISLLLKAAYNVGGHTISVDMIQNSILGCRLARPGQWLWSLFSSTKKFKARDERKAYGIEHPEPLLHFALCSGSHSDPSARIYTPKNVFQELEVAKEEYIRTAFRLHKGQKVLLPKLVESFSKESGLCQADLVEIIEHCMPNSLGKGIHWGQHGKFWKSIEWTPHNFAFRYLLSRELPK* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0614 581 PANTHER UNCHARACTERIZED 16 579 - -
Vvi3g0614 581 Pfam Protein of unknown function, DUF547 367 502 IPR006869 -
Vvi3g0614 581 Pfam Leucine-zipper of ternary complex factor MIP1 26 106 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0614 Vvi-Chr3 5269488 5273645 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0614 - - vvi:100255635 1144.03