Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0611 ATGAGCCTCATCAGTGACCAAAGTCCTGCTTCAGATGCCACCATTTGCTTCACAGAGGAGCAAGAAGCTCTGGTGGTGAAGTCATGGAATTCAATGAAGAAGAATTCTGGAGAGTTGGGTCTTAAATTCTTCTTAAAAATATTTGAGATTGCACCATCAGCTCAAAAACTGTTCTCATTCCTGAAAGACTCAAAGGTTCCCCTAGAGAAGAACCCAAAGCTCAAGTCCCATGCTATGGCTGTTTTTGTTATGACTTGTGAATCAGCTGTTCAACTTCGAAAAGCTGGCAAAGTGACAGTGAGAGACTCTACCCTGAAGAAACTAGGTTCTGTTCACTACAAATCTGGTGTACTTGATGAACACTATGAGGTACATATAGTTGTTATAAAGTGTATGACAATTTCAAGATGCTGTAACTCTTTCAATCTGATTATGTGCAGACAATTTTTGAACCCGAAAAATTAA 465 0.3935 MSLISDQSPASDATICFTEEQEALVVKSWNSMKKNSGELGLKFFLKIFEIAPSAQKLFSFLKDSKVPLEKNPKLKSHAMAVFVMTCESAVQLRKAGKVTVRDSTLKKLGSVHYKSGVLDEHYEVHIVVIKCMTISRCCNSFNLIMCRQFLNPKN* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0611 154 SUPERFAMILY Globin-like 12 126 IPR009050 -
Vvi3g0611 154 PRINTS Plant globin signature 18 35 - -
Vvi3g0611 154 PRINTS Plant globin signature 71 99 - -
Vvi3g0611 154 PRINTS Plant globin signature 43 63 - -
Vvi3g0611 154 ProSiteProfiles Globin family profile. 17 124 IPR000971 GO:0020037
Vvi3g0611 154 Gene3D Globins 15 134 IPR012292 GO:0019825|GO:0020037
Vvi3g0611 154 Pfam Globin 42 124 IPR000971 GO:0020037
Vvi3g0611 154 PANTHER LEGHEMOGLOBIN-RELATED 14 125 IPR001032 GO:0019825|GO:0020037
Vvi3g0611 154 ProSitePatterns Plant hemoglobins signature. 71 82 IPR019824 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0611 Vvi-Chr3 5259285 5260752 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0611 - - vvi:104878801 244.588