Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0609 ATGGGAATTTGCAGCTCCTGCGAGTCTACGTCTGTCGCCACCGCGAAGCTGATTCTCCAAGATGGGAAGCTTCAGGAGGTTCCATGTCCGGTGAAGGTCTCATTCCTGCTGCAGAAGAACCCTGCTTGTTTTATCTGTAATTCGGATGATATGGAGTTTGACGACTTCATTTCGGCCATAAACAGCGACGATGAGCTTCAGCCGGATCAGCTCTACTTTGCGCTGCCAATGAGTTGGTTGAAGCGGCCGCTCCGCGCGGAGGAGATGGCCTCTTTGGCCGTCAAGGCGAGTGAAGCTCTCATGAGGGGTGGTGCAAAGGGATGTGGGTGTTGCGGAAAAGGAGTACTGGGGCAGGTGGCGTTTTCCCAGAAGGAGTATGTGAAGGCAACCCGACTAGTGGACGCCGATGACGGCAGTGGAAGATTGATTGAAAAGAGAAGAGAAAAGGGTGGCGGCGGCAGTGGCCAACATGGCCGTCGTGGCCGTGATTTTACTACGAACCTGACCATGGTTCCGGAGGAATGA 525 0.5429 MGICSSCESTSVATAKLILQDGKLQEVPCPVKVSFLLQKNPACFICNSDDMEFDDFISAINSDDELQPDQLYFALPMSWLKRPLRAEEMASLAVKASEALMRGGAKGCGCCGKGVLGQVAFSQKEYVKATRLVDADDGSGRLIEKRREKGGGGSGQHGRRGRDFTTNLTMVPEE* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0609 174 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 129 - -
Vvi3g0609 174 MobiDBLite consensus disorder prediction 140 174 - -
Vvi3g0609 174 MobiDBLite consensus disorder prediction 140 156 - -
Vvi3g0609 174 Pfam PADRE domain 1 173 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0609 Vvi-Chr3 5239376 5239900 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0609 - - vvi:109122340 321.242