Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0608 ATGAAATACAATGAGATACCTCACTTCAGCCACCCCCAACACAAGCTCAAGTTTGAGTATATTGAGCTTCCATTCAAGTGTGATGGCTGCAAGGAAGCTGGGATAGGATCGCGCTACAAGTGCAGCATATGTGACTATGATCTTCACACACATTGTGCCCTTCCTTCACCCTCCATCACCCACCCTTTCTATACCAAGTGTTCCTTCCAGTTCCTCCCCAGGCCGCCTGGCGATGCTGCCCGCTTCTGCAACGCCTGCGAGAAGGACATCAACGGCTTCTTATACCACTGCAACTCCTGCGGGTTCGACCTCCACCCCTGCTGTGCGAGGCTCCCCATGGTGCTTGACGATGGGGAGATGAAGCTGTATCTGTATAGGAAGGTGAGCGCCTCGTGTGATCGGTGCGGGAGGAAGGGAAGGAGCTGGAGCTATAGATCAAAGTGCAAGAAGTATAATCTGCACGTGGCGTGTGTGAAGGAAATGCTGGTGGAGAGCTGGCATGAGATATATTATGGGCGGGGAAATGGTAGGAAGTTGGAGACGAGAATTCCAAGCATCAAAAGCACACTCCAGGCACATCATCATAAGAGTAAAGGCAAAGCGAAGAAATGCTGTGAGATGGCTGGCTTGGCTATGCAGTTTGTTGTCTCCGCAGTTCTAGGTGATCCGACAACTTTGATTGCTGGGGTCGTTGGGTCCTTGATGTCTAGGTCTTGA 717 0.5119 MKYNEIPHFSHPQHKLKFEYIELPFKCDGCKEAGIGSRYKCSICDYDLHTHCALPSPSITHPFYTKCSFQFLPRPPGDAARFCNACEKDINGFLYHCNSCGFDLHPCCARLPMVLDDGEMKLYLYRKVSASCDRCGRKGRSWSYRSKCKKYNLHVACVKEMLVESWHEIYYGRGNGRKLETRIPSIKSTLQAHHHKSKGKAKKCCEMAGLAMQFVVSAVLGDPTTLIAGVVGSLMSRS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0608 238 Gene3D - 21 66 IPR043145 -
Vvi3g0608 238 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 13 67 IPR002219 -
Vvi3g0608 238 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 4 235 - -
Vvi3g0608 238 Pfam C1 domain 9 53 IPR004146 -
Vvi3g0608 238 Pfam C1 domain 75 109 IPR004146 -
Vvi3g0608 238 SUPERFAMILY Cysteine-rich domain 30 115 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0608 Vvi-Chr3 5237935 5238651 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0608 - - vvi:100264105 507.679