Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0602 ATGGGGAAAAAGGGTTACTTGGCGATGAGGACTGACACTGATACTACTGATTTGATCAGTTCTGATCTCAGAGACCTTGGTAATGCTGCTAAGAAGCTTGCCACTCATGCCATTAAGCTTGGTGGTCTGGGCTTTGGCACTACATTTCTTGAGTGGTTGGCTTCTTTTGCTGCCATTTATTTATTAATCTTGGATCGAACAAACTGGAAGACAAACATCCTTACGGCACTTCTAATCCCTTACATTTTCTTTAGTCTTCCTTCAATATTATTCAACTTTTTCAGTGGTCAGGTTGGAAAATGGATTGCTTTTATTGCTGTAGTGCTGCGCCTCTTCTTCCCAAAACGTTTCCCAGATTGGCTGGAAATGCCTGCAGCTTTGATTCTTGTTATAGTGGTGGCTCCCAGCTTGTTTTCGAGCACTATAAGGGGTGACTGGATTGGCCTCGTAATATGTCTTGCAATTGGGTGTTATTTGCTGCAGGAACACATCAGGGCATCTGGTGGGTTCAGAAATTCCTTTACACAGAGGCATGGCATATCAAACTCTATTGGATTAATCCTTCTGCTGGTCTATCCTGTCTGGGCTCTGGTACTTCACTTCCTATAG 609 0.4335 MGKKGYLAMRTDTDTTDLISSDLRDLGNAAKKLATHAIKLGGLGFGTTFLEWLASFAAIYLLILDRTNWKTNILTALLIPYIFFSLPSILFNFFSGQVGKWIAFIAVVLRLFFPKRFPDWLEMPAALILVIVVAPSLFSSTIRGDWIGLVICLAIGCYLLQEHIRASGGFRNSFTQRHGISNSIGLILLLVYPVWALVLHFL* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0602 202 Pfam Cold acclimation protein WCOR413 9 189 IPR008892 GO:0016020
Vvi3g0602 202 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 1 201 IPR008892 GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0602 - - vvi:100248690 381.333