Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0595 ATGGAGTTTATTGTAGAAGAAGGCAAACACCTCAACAACGATTGCTCCACTCTTGTTCTGCCTGCTTTGTCGATTGGAAATGTAGGGCAGTTGGCGGTGGACCTCTTGATCTCGTCTACGAGAGCGGAGAGAATAGGTTATTTGGATGACCCTTATGTGCTACCTTGTGTTGGCAATGATGCATATGGCCCTATACCACGAGGCGAGGTTGCTCTGCCTCTCGAAGCTTATGATTCTTCTCTTAATAAATTGACACTTGTCCAACAAAGATCTCCAGTTCTTAAGGGGATGATGGTTGAATTTGCTAAGAATTTGGCTTATTTTGCTGCTGACAGTGGGAAGAAGCATGTTATTGTGCTCTCTAGCCTAGATTTTGGGCAGTGGCAAAGGATTGATATGTCAAGTGGTTCACAGATATATTACATCTCCAGTGCCAATATGGATGGAGCAGACGATGACTGTGAAAAACTAGGGTGGAAAAAATTACATGAATATAACCCTGCTCAGAGGCGATGGAAGTATCTTAGTACATTAGCTGCAGGAAATGCTATGCAGGAAGATGGTTTGGCTTTTGAAGATGAACTTGAAGACGAAGAAGATTACTACCCAAGTTTGCCATTTGCTGCACTTTTATCTTGTTTTAAGGCCAAAGGTTTGAAGGTAACTTGCTTATTATGTTACTGCTCAGAAGGGGACAATATACCTGATGCTTTCAATCTGGCTGACGCGGCATGCAAACTTCTTGAGCTTAGCCCCCAAAATTTCCATGGTGATCAAGGTGGTAATTGGGCTATTCCATTTTCATGGAAGACTGTTTATGGGCCACCCCCAGATATGTCTCTCTTTTAG 849 0.4287 MEFIVEEGKHLNNDCSTLVLPALSIGNVGQLAVDLLISSTRAERIGYLDDPYVLPCVGNDAYGPIPRGEVALPLEAYDSSLNKLTLVQQRSPVLKGMMVEFAKNLAYFAADSGKKHVIVLSSLDFGQWQRIDMSSGSQIYYISSANMDGADDDCEKLGWKKLHEYNPAQRRWKYLSTLAAGNAMQEDGLAFEDELEDEEDYYPSLPFAALLSCFKAKGLKVTCLLCYCSEGDNIPDAFNLADAACKLLELSPQNFHGDQGGNWAIPFSWKTVYGPPPDMSLF* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0595 282 PIRSF UCP010044 14 282 IPR016562 -
Vvi3g0595 282 Pfam PAC2 family 18 246 IPR019151 -
Vvi3g0595 282 Gene3D - 14 173 IPR038389 -
Vvi3g0595 282 Gene3D - 200 282 IPR038389 -
Vvi3g0595 282 FunFam Proteasome assembly chaperone 2 14 162 - -
Vvi3g0595 282 PANTHER PROTEASOME ASSEMBLY CHAPERONE 2 1 282 IPR016562 -
Vvi3g0595 282 FunFam Proteasome assembly chaperone 2 189 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0595 Vvi-Chr3 5135516 5144657 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0595 K11876 - vvi:100243552 561.992