Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0564 ATGGTGGATTCAAAGGGGTTTCTCACATATCTCTGTTACTTCATCTTCTTCCTCCCTGTCTTTGTTCTTCTCTTTGCTCTTGGCATCATCAAAGGTGGTATTTTCAGTCCCTTTGTGTTTCTAGTAATAGCTTTTGGGGACATAGGTGTTGTGGTAGGGCTATGGCCTTGTCATCTTGTTTGGACTGTTTACTGTATAAACAGGACAAAGAAATTTGATCCATATTTGAAGTGCCTATTGATTCTTATGGTCCCAATTCCAGTAGCATTGTGGACAGTTGTTGGGGTGGTTGGTAGTGTGATTATGGGAATTGGTTATGGTTTCATTTGCCCTGTGATGGATACATTCAAGGCTGTTAGCATGGAAGGTGTTTCTTTACGAACAAAATTGATCAGATGCTTCACGGATGGTACTTGGAGCAATGTTTGGGGTGCCTGCACAATTGTCCGTGATTTTGCTGATTTTTCTTTCCATTCTTACTTCTCAGTGATGGATGGATTGCTTGAATCAAAAGGGGAGAAGCCCATAGAACTAAAGGTTTTTGAGATACCAGGTTGCATTTTATGTGCAATTCTCGGAGTTCTGGTTGACGTGCCTTTTATAACTCTGATAGTCCTCTATAAATCCCCCATCTTGCTGTTCAAAGGGTGGAATCAGTTACTGCATGATCTTATTGGAAGGGAGGGGCCTTTCTTTGAAACCATCTGTGTCCCCTTTGCAGGGCTTTTGATTTTGTTGTGGCCAATTGTGGTTGTTTTAGCTGCTTTGGCTGGAGTTATTTCGAGTTTCTTCTTTGGCTGTTGTGCTGCTGTTATTGCATATCAGGAAAGCTCTATAAAGAGGGGGTTGCTATATATAGTTGCATCTATGTCATTGTTTGATGAGTCCACCAATGACTTCCTTTACCTACGAGAAGGATCCTGCTTTCCCAGGTATTCAAGTTTTGCATCACAAATATGGGATAACTACTTCAAAGCATGTGAGCACACCGGGAAAGAGCTTCTCAGAGCTGGAGCTGTTGGGATGCCAGATCTGGAGACATGGCGAAATTCAAAGAACAAGATAATTAATATTGGAATTCCTGCTTATTCGTTTCTGGAATGCTTCCTTCACTCTATCAAGAGTGGTTCCCCTGGATTTCTCATGCGTGACAATGTTGAATTAACAAGTTTGAACAGACCTGAGGGAAGGGTTTTTGACTGGATGTTTGAGCCCATGAGCATCATGAAAGAGCAGCTCAAGAGACTAAATCTAGTAGAGACTGAAGAATTATACCTCTACAAATTTTCTCTGTACCATGGTGATAGAGAAAGAATGGAAGCTTGGCAAAATGGTGGCTTCCCACCAGAAGATGAGATTAGGAGAGCTCAGTTAGAGGGTATTAGTAGAAGGCTGCAGGGATTTTGTTTGACACTTTCAAGACTACCGACATCCAGGCGCTGGTTTGATGGAGTGGTGAAAGAGATAGAACAAGAAGCAAGGCGGGGATTGGATGGGTTTGATGCACTTGATGATCTAACAGCAGTTGTTTAG 1533 0.4214 MVDSKGFLTYLCYFIFFLPVFVLLFALGIIKGGIFSPFVFLVIAFGDIGVVVGLWPCHLVWTVYCINRTKKFDPYLKCLLILMVPIPVALWTVVGVVGSVIMGIGYGFICPVMDTFKAVSMEGVSLRTKLIRCFTDGTWSNVWGACTIVRDFADFSFHSYFSVMDGLLESKGEKPIELKVFEIPGCILCAILGVLVDVPFITLIVLYKSPILLFKGWNQLLHDLIGREGPFFETICVPFAGLLILLWPIVVVLAALAGVISSFFFGCCAAVIAYQESSIKRGLLYIVASMSLFDESTNDFLYLREGSCFPRYSSFASQIWDNYFKACEHTGKELLRAGAVGMPDLETWRNSKNKIINIGIPAYSFLECFLHSIKSGSPGFLMRDNVELTSLNRPEGRVFDWMFEPMSIMKEQLKRLNLVETEELYLYKFSLYHGDRERMEAWQNGGFPPEDEIRRAQLEGISRRLQGFCLTLSRLPTSRRWFDGVVKEIEQEARRGLDGFDALDDLTAVV* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0564 510 PANTHER MEMBRANE PROTEIN 4 313 IPR040229 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0564 Vvi-Chr3 4923020 4926411 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0564 - - vvi:100255630 964.526