Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0555 ATGGGGAGAAAGAAGAAGAGAGGTGCGAGGGGAATCCTCAAGCCGTCACCTGGCTGTAGTGGGGAAACCGTGGCCGGAGGAGCTCTGGGGGTGACTGGGTACGAGCTGTTGAGACAACAAAGCATCAGAGACAACATGCTTAGAATGCAGACACTTGGCATTTTGGACCTTTCCCTCAACCTCGCCTCCCACTTTCTTCCTCCCAAGCGTCCCCGGAGGAACCCTCCTCACCACAAACTTTCTCTTCCCTCTCCTTCTCAGCCTCTTCGACGCTCTTCTAGGTTGAAGAGTATGAGTCCTGTTAGCTATTCAGAACTACGCCCTAAGATGAAGAGCCAATTCTCAATGGCTCTGATGAGCAATGAGAGTCATACACGAAAGGGTTCAAAACCAGAGGTTTATGCTGAAGAACATGAGGAGCTATTGGGTGATTGCAAGACAAGTTGGACCCTGTTTATAGATGGATATAACAAGGAGGGGAAACGCATATATGATCAGGTGAAAGGGAAGACATGCCATCAATGCAGGCAGAAAACTCTGGGTTACCGCACTCATTGCAGCAAATGTAAATTGATCCAAGGGCAGTTTTGTGGAGACTGCTTATACATGAGATATGGGGAGAATGTGATAGAAGCCAACAAGAACCCTAGTTGGATTTGCCCAGTCTGTCGAGGAATTTGCAACTGCAGTTTATGCCGACAAGCAAAAGGATGGATGCCCACTGGTCCTATGTATAAGAAGGTTTCAGAACTAGGGTTCAAGTCTGTGGCACATTATCTCATCCAAACACGGCGTGCTAAGACAAGCTCAGAAGACCCTGATGCTGAAATTTTGGTTTCTGCAAAGACACCACAGTCCATGGCTGATACAGGAGCGCATGCTTTGCAGATAATATCACTTGATGCAGACATGGAAGCTGATGGGTGCCCAAAATCCCAACATGACAACAATGATGATAACAAATATGAAGCAATTCAAGAGGTGGCAGGGACAGAAGTGCATCACTTGGATGCCAATGGTGCATATGTCAAAGATGATGGTAATGAAGATGAAAGTAGTGGACTGGGAATTTGCTTAAACCCTCACATGGAACCTTCTGTTGTCGACCAACCATTCCCAAATCTGCCTTAA 1131 0.4677 MGRKKKRGARGILKPSPGCSGETVAGGALGVTGYELLRQQSIRDNMLRMQTLGILDLSLNLASHFLPPKRPRRNPPHHKLSLPSPSQPLRRSSRLKSMSPVSYSELRPKMKSQFSMALMSNESHTRKGSKPEVYAEEHEELLGDCKTSWTLFIDGYNKEGKRIYDQVKGKTCHQCRQKTLGYRTHCSKCKLIQGQFCGDCLYMRYGENVIEANKNPSWICPVCRGICNCSLCRQAKGWMPTGPMYKKVSELGFKSVAHYLIQTRRAKTSSEDPDAEILVSAKTPQSMADTGAHALQIISLDADMEADGCPKSQHDNNDDNKYEAIQEVAGTEVHHLDANGAYVKDDGNEDESSGLGICLNPHMEPSVVDQPFPNLP* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0555 376 MobiDBLite consensus disorder prediction 1 20 - -
Vvi3g0555 376 MobiDBLite consensus disorder prediction 66 103 - -
Vvi3g0555 376 MobiDBLite consensus disorder prediction 85 103 - -
Vvi3g0555 376 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 164 260 IPR018866 -
Vvi3g0555 376 PANTHER OS05G0300700 PROTEIN 32 283 IPR040221 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0555 Vvi-Chr3 4854093 4857037 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0555 K23408 - vvi:100265793 746.117