Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0539 ATGGCATCAGAGGGGAGACAGGCTAATCCCGTCAAGCACTATGTTCTAGTTCATGGGTCTTGCCATGGTGCCTGGTCTTGGTACAAGATTGTGGCACTACTAAAATCATCTGGCCACAAAGTCACTGCTCTGGACTTGGCTGCTTCTGGAATTAACCCAAAACAAGTGGGTGATCTGCGATCTATTTCTGAGTATTTCCAGCCACTGAGGGACTTCATGGAGTCACTCCCTGCAGATGAAAGGGTGGTTCTCGTTGGACACAGCTTGGGTGGGTTGGCCATTTCTCAGGCCATGGAGAAGTTCCCAGAAAAGGTTTCTGTAGCTGTTTTTGTTACTGCCTCAATGCCTGGTCCCACTCTCAACATTTCCACTCTCAATCAAGAGTCACTCAGGAGACAAGGTCCTCTACTAGACAGCCAGTTCACATATGATAATGGCCCCAACAATCCTCCCACCACTTTCACCTTTGGCCCCTTGTTCTCATCACTGAATGTGTATCAGTTGAGCCCAACTGAGGACTTGGCACTAGGGACTATGTTGATGAGACCCTTACGCTTGTTCAGTGAAGAAGACATGTCAAAGGATCTCATGTTGTCGAAGAAATATGCCTCGGTTAAACGTGTCTTTATTATTTCTGAGGAAGACAAGCTGGCGAAAAAGGATTTTCAACTCTGGATGATCGAAGAAAACCCACCTGATGCTGTTAAAGAGATTAAAGGATCTGATCACATGGTCATGATGTCTCAGCCAAAAGAGCTTTGGGTTCACCTGCAGGCAATTGCTGAGAAGTATTCTTGA 798 0.4637 MASEGRQANPVKHYVLVHGSCHGAWSWYKIVALLKSSGHKVTALDLAASGINPKQVGDLRSISEYFQPLRDFMESLPADERVVLVGHSLGGLAISQAMEKFPEKVSVAVFVTASMPGPTLNISTLNQESLRRQGPLLDSQFTYDNGPNNPPTTFTFGPLFSSLNVYQLSPTEDLALGTMLMRPLRLFSEEDMSKDLMLSKKYASVKRVFIISEEDKLAKKDFQLWMIEENPPDAVKEIKGSDHMVMMSQPKELWVHLQAIAEKYS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0539 265 Gene3D alpha/beta hydrolase 11 265 IPR029058 -
Vvi3g0539 265 PANTHER METHYLESTERASE FAMILY MEMBER 12 262 IPR045889 -
Vvi3g0539 265 FunFam (S)-hydroxynitrile lyase 9 265 - -
Vvi3g0539 265 Pfam Alpha/beta hydrolase family 15 253 IPR000073 -
Vvi3g0539 265 SUPERFAMILY alpha/beta-Hydrolases 15 262 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0539 Vvi-Chr3 4709979 4710972 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0539 13 174 Miscellaneous Gene Families AT5G10300 41.358 2.56e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0539 - - vvi:100253676 509.605