Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0530 ATGTTGATGAGACCCGTACGCTTGTTCAGTGAAGAAGACACGTCAAATGAGCTCATGTTGTGGAAAAAATATGCCTCGGTTAAACGTGTCTTTATTATTTCTGAGGAAGACAAGGTGATGAAAAAGGATTTTCAACTCTGGATGATCCAAAAAAACCCACCTGATGCTGTTAAAGAGATTAAAGGATCTGATCACATGGTCATGATGTCTAAGCCAAAAGAGCTTTGGGTTCACCTGCAGGCAATTGATGAGAAGTATTCTTGA 264 0.3977 MLMRPVRLFSEEDTSNELMLWKKYASVKRVFIISEEDKVMKKDFQLWMIQKNPPDAVKEIKGSDHMVMMSKPKELWVHLQAIDEKYS* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0530 87 SUPERFAMILY alpha/beta-Hydrolases 14 79 IPR029058 -
Vvi3g0530 87 Gene3D alpha/beta hydrolase 1 87 IPR029058 -
Vvi3g0530 87 PANTHER METHYLESTERASE FAMILY MEMBER 1 83 IPR045889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0530 Vvi-Chr3 4625594 4625857 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0530 - - vvi:100260547 176.407