Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0528 ATGAGCTCTGCACACTTGAGTTCGATTCGTTTTGATCGGGAATGGTTCAGGAAGAGTGAAACGAAGAGTTCAAATGGAAGGAAGCTTCATATTAGAGGATCAGTGACTTCATCCCCGCAAAGCGTGCAGTTTGCAGAGGCAAAAGCCGAGAAATCTGGAAAGGCAGTTCGGATTGGTGTACTTGGGGCCAGTGGCTACACTGGTTCAGAGATTGTTAGACTTCTGGCAAACCATCCACACTTTGGCATTACCCTCATGACTGCAGACAGAAAAGCTGGTCAATCAATTGGATCAGTATTTCCACATTTGATCACACAAGATTTACCAGATATGGTTGCTATCAAGGATGCAAAATTTTCTAATGTGGATGCTGTGTTTTGTTGTTTGCCACATGGAACCACACAGGACATAATCAAAGCTCTTCCCAAGAGTTTAAAGATTGTTGACCTTTCTGCAGACTTTCGTCTGCAAGAAATTGCTGAATATGAAGAATGGTATGGTCAGCCACACAGAGCCCCAGATTTGCAGAAAGAAGCAGTGTATGGCTTGACAGAGATTTTGAGGGAAGAAATTAAAGCTGCACGTCTTGTTGCCAATCCTGGCTGTTATCCTACAACCATTCAGCTTCCTCTTGTTCCTTTGTTGAAGGCTAATCTCATTGAAACAAGAAATCTCATTATTGATGCAAAATCTGGTGTGAGTGGAGCAGGTCGTGGTGCCAAGGAGGCAAATCTGTACACTGAAATAGCTGAAGGCATTCATTCTTATGGTATTACAAGGCATCGCCATGTTCCTGAGATTGAGCAGGGACTTTCAGATGCTGCACATGCAAAAGTGACTGTCAGCTTCACTCCTCACCTAATGCCAATGAGCCGTGGTATGCAATCAACTATATACGTGGAAATGACCCCAGGAGTCACAATTGAGGATTTGTACAAACAATTAAAGATTGCCTATGAGGACGAAGAATTTGTAATTTTGCTGGAGAAAGGAGTTGTTCCTCATACTCGAAATGTCCGTGGATCCAATTACTGTCTTCTGAATGTCTTTCCTGATCGAATCCCTGGACGAGCAATTATAGTATCTGTTATTGATAATCTTGTGAAGGGAGCTTCTGGTCAAGCCTTGCAGAATCTTAATGTGATGATGGGATTGCCGGAGAATACAGGACTTCTCTACCAGCCATTGTTTCCATAA 1197 0.4294 MSSAHLSSIRFDREWFRKSETKSSNGRKLHIRGSVTSSPQSVQFAEAKAEKSGKAVRIGVLGASGYTGSEIVRLLANHPHFGITLMTADRKAGQSIGSVFPHLITQDLPDMVAIKDAKFSNVDAVFCCLPHGTTQDIIKALPKSLKIVDLSADFRLQEIAEYEEWYGQPHRAPDLQKEAVYGLTEILREEIKAARLVANPGCYPTTIQLPLVPLLKANLIETRNLIIDAKSGVSGAGRGAKEANLYTEIAEGIHSYGITRHRHVPEIEQGLSDAAHAKVTVSFTPHLMPMSRGMQSTIYVEMTPGVTIEDLYKQLKIAYEDEEFVILLEKGVVPHTRNVRGSNYCLLNVFPDRIPGRAIIVSVIDNLVKGASGQALQNLNVMMGLPENTGLLYQPLFP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0528 398 ProSitePatterns N-acetyl-gamma-glutamyl-phosphate reductase active site. 197 213 IPR023013 GO:0003942
Vvi3g0528 398 Pfam Semialdehyde dehydrogenase, NAD binding domain 57 193 IPR000534 GO:0016620|GO:0051287
Vvi3g0528 398 Gene3D - 57 384 - -
Vvi3g0528 398 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 50 398 - -
Vvi3g0528 398 SMART Semialdhyde_dh_3 57 194 IPR000534 GO:0016620|GO:0051287
Vvi3g0528 398 FunFam N-acetyl-gamma-glutamyl-phosphate reductase 200 366 - -
Vvi3g0528 398 Hamap N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 56 392 IPR000706 GO:0003942|GO:0006526|GO:0070401
Vvi3g0528 398 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 202 366 - -
Vvi3g0528 398 Pfam Semialdehyde dehydrogenase, dimerisation domain 211 369 IPR012280 GO:0008652|GO:0016620|GO:0046983
Vvi3g0528 398 NCBIfam N-acetyl-gamma-glutamyl-phosphate reductase 56 398 IPR000706 GO:0003942|GO:0006526|GO:0070401
Vvi3g0528 398 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 56 227 IPR036291 -
Vvi3g0528 398 Gene3D Dihydrodipicolinate Reductase; domain 2 200 366 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0528 K00145 - vvi:100255475 789.645