Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0520 ATGGGTCAAAAGAAGGGCGTCCGTACGATCTCCCAAGCCGCTTTCGACGAGTTGGTGAGAGAGAACATGGAAGACTTAGGCATGGAGCCCGCTGAAGCCCTCGAAGACGCCCTGCAAACCCTAACCCTCCAGGGCGTCGACCTCTCCGGCATTGTCGCGTGTGTTCCTGGAGACGGCAGTGTTGGGGACAATCCAGTGATTCAGTCTTTGGATCGGTTGAAGCAATTGGATTCTGATTGGGTGGGCTTTGGAGAGATGGTGGAGGTGTTTGATAAGCTAACCGAGTTGTGTTCGATTGAGGGATCCGACAATGCGGCGATTGCGACGAGGAATGGGGGTGTGGAAGTGGTGTGTTCTGTTTGTTCAAAGATTCGGGTGGGGTGTGAAGGTGATTCGGTTCTTGTTTCTGGGTTGACGACAATGGCATCATTGCTTCACGATGTTCAAAGTACAGAAACATTTCAAAAGATTGGCGGACCAAAAATTGTGGTGGGTGTCCTGAATGATGCCAGTCAAAATGTAGACATCTTGAACAGTGGTTTCTCTGTTGTTGCTGCGGCTGCAACTGGTAATGAGATTCTGAAGGAATCATTCATGGACTTGCAAATTGATGAGCTCATCATCCAAATTATGAAGAGCCATGGTAGAGGCAGAGTCCACAGCATATATGATGCTATATGTGTTCTGTTAACACCTGATGATAATCGTGTCGTGGCTTCCCAAGTTTATGGTTATGCTCGAAGATTTGCCAAAGCTGGAATTGCAGGAGCTCTTGTAGAATCACTTGGTGAAGGGCTTCGTTCACCTAGTCTGGTTTCAGCAAGCATTGCATTAAAGGCTGTTGCTGTCAATGATGAAATCTGTAAATCCATTGCTGAAAGTGGAGGTATAGATGCAGTGCTCCGATGCATTGATGACAGTGGTGAACAAGGCAACAAAACTGTAGCCAGAGCTTGCTGTTCTTTGTTATCTAAGTTGGCAGGAAGCGACGCAAATAAGAGTACTATAGTTGAGAAGGGTGGAATGGATAGGCTAATCAAACTCTCTGCCAGATTTTCTGATGACCCTTCTGTTCTGCAAGAGGTTATGCCCATTTTTTGTGTCCTTTCATTGAGATCACCAGACAATGCAGCCCGTGCTGTTGAGGCTGGTGCTGGAGACCTTGCCATCCAGGCCATGCAGAAGTTTCCTGCAGCACAACAGATGCAGAGGAACTCTTGTCTCATGATCCGAAACCTTGTGGTCAGGAACCAAGAAAACAGAACCCTTTTGCTCAGTAATGGCATTGAGAAGATAATAAGAAAAGCCAAAGAAAACCATGAAAGTTGCAAAGATGCTGCTAATGACGCACTGAGGGATCTGGGTCTTGACTACAATTCATAG 1383 0.4671 MGQKKGVRTISQAAFDELVRENMEDLGMEPAEALEDALQTLTLQGVDLSGIVACVPGDGSVGDNPVIQSLDRLKQLDSDWVGFGEMVEVFDKLTELCSIEGSDNAAIATRNGGVEVVCSVCSKIRVGCEGDSVLVSGLTTMASLLHDVQSTETFQKIGGPKIVVGVLNDASQNVDILNSGFSVVAAAATGNEILKESFMDLQIDELIIQIMKSHGRGRVHSIYDAICVLLTPDDNRVVASQVYGYARRFAKAGIAGALVESLGEGLRSPSLVSASIALKAVAVNDEICKSIAESGGIDAVLRCIDDSGEQGNKTVARACCSLLSKLAGSDANKSTIVEKGGMDRLIKLSARFSDDPSVLQEVMPIFCVLSLRSPDNAARAVEAGAGDLAIQAMQKFPAAQQMQRNSCLMIRNLVVRNQENRTLLLSNGIEKIIRKAKENHESCKDAANDALRDLGLDYNS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0520 460 Coils Coil 433 453 - -
Vvi3g0520 460 Gene3D - 88 458 IPR011989 -
Vvi3g0520 460 SMART arm_5 284 328 IPR000225 GO:0005515
Vvi3g0520 460 SMART arm_5 329 371 IPR000225 GO:0005515
Vvi3g0520 460 SMART arm_5 373 415 IPR000225 GO:0005515
Vvi3g0520 460 SUPERFAMILY ARM repeat 93 455 IPR016024 -
Vvi3g0520 460 PANTHER UNCHARACTERIZED 8 455 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0520 K24166 - vvi:100253702 889.412