Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0519 ATGGGTTTCACTTCTGGACAAGGAGTAGTCACCTTACTGGTGTTAACTGCTTCCCTGTTAGCGGTCGGTATGGCAAACAGACCCATTGCAGGTAAGCCTGCAAATCACTGGAATTCCGGCTTCAATCACAGCATTTGGGGTCCCAGAAACAATCCTTTCCACCCCAATAATACCCGGCCTCCCAAGAAGTTCATCGTCGGTGGATCGGAGCGCTGGCGCTACGGCTTTAACTACACTGATTGGGCTCTCAAGAATGGACCCTTCTACATTAACGATACTCTGGTGTTCAAGTATGATCCTCCAAACAGCACCACATTTCCTCACAGCGTATACTTGTTGCCAAACTTTGGGAGCTTCCTGACGTGCGACCTGAGTAGAGCCAAGCAAGTGGCTACGGTGGCGCAAGGAGGCAGCAAGGGGTTTGAGTTTGTGCTAAAGAACTTGTGGCCTCACTACTTCGCCTGCGGGGAACACAATGGGCTGCACTGCAAAGAGGGAATGATGAAGTTCTCTGTGATGCCGCTATTTCGTCCCTGCCATGGCTGA 546 0.511 MGFTSGQGVVTLLVLTASLLAVGMANRPIAGKPANHWNSGFNHSIWGPRNNPFHPNNTRPPKKFIVGGSERWRYGFNYTDWALKNGPFYINDTLVFKYDPPNSTTFPHSVYLLPNFGSFLTCDLSRAKQVATVAQGGSKGFEFVLKNLWPHYFACGEHNGLHCKEGMMKFSVMPLFRPCHG* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0519 181 Gene3D - 62 177 IPR008972 -
Vvi3g0519 181 ProSiteProfiles Phytocyanin domain profile. 62 176 IPR003245 GO:0009055
Vvi3g0519 181 PANTHER GLYCINE-RICH PROTEIN-LIKE 1 178 - -
Vvi3g0519 181 SUPERFAMILY Cupredoxins 62 173 IPR008972 -
Vvi3g0519 181 Pfam Plastocyanin-like domain 75 167 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0519 Vvi-Chr3 4445631 4446279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0519 57 167 Miscellaneous Gene Families AT3G27200 29.464 1.68e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0519 - - vvi:100248603 389.423