Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0517 ATGGGTTTCACTTGTGCACAAGGGGTACTCACCTTATTGGTATTAACTGCGTCCATGTTAGCAGTTGGTACGGCAAGCAGACCCATTGCAGGCAGGCCTGCAAACTATTCGAATTTCGGCTTCAACCACAGCTTTTGGGGTCCCAGAAATGGTCATCCATTTCACCCCAATAATAATAGCACCCGACCTCCCAAGAAGTTCATCGTGGGTGGATCAGACCACTGGCGCTATGGCTTTAACTACACTGACTGGGTTTTCAATAATGGCCCCTTCTACGTTAATGATACTTTAGTGTTCAAGTATGATCCTCCAAGCAAGACAACATTTCCTCACAGTGTGTACTTGCTGCCAAATCTTCGGAGCTTCATGACATGCGACCTCAGCAGGGCGGAGCAGGTGGCTACGGTGGCTCAAGGAGGCGGTGAGGGTTTCGAGTTTGTGCTGAAGAACTGGTGGCCTCACTACTTTGCCTGCGGGGAACATGATGGGGTGCATTGCAAAGAGGGGATGATGAAGTTCTTTGTGATGCCGCTGATTGGTCCTTACCATGGCTGA 555 0.4973 MGFTCAQGVLTLLVLTASMLAVGTASRPIAGRPANYSNFGFNHSFWGPRNGHPFHPNNNSTRPPKKFIVGGSDHWRYGFNYTDWVFNNGPFYVNDTLVFKYDPPSKTTFPHSVYLLPNLRSFMTCDLSRAEQVATVAQGGGEGFEFVLKNWWPHYFACGEHDGVHCKEGMMKFFVMPLIGPYHG* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0517 184 ProSiteProfiles Phytocyanin domain profile. 65 179 IPR003245 GO:0009055
Vvi3g0517 184 PANTHER GLYCINE-RICH PROTEIN-LIKE 1 179 - -
Vvi3g0517 184 Pfam Plastocyanin-like domain 79 170 IPR003245 GO:0009055
Vvi3g0517 184 SUPERFAMILY Cupredoxins 65 176 IPR008972 -
Vvi3g0517 184 Gene3D - 64 177 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0517 Vvi-Chr3 4427053 4427709 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0517 - - vvi:100250324 407.912