Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0515 ATGCATAGAAAGGGATCACGCCATCGTGCTGCCGAGTCCAGGTTCAAGGAGAGAGAATTAAGGAGACAAGATGAGATAAAGAAGAGAATAGCTTTATCTGATGGTTCCATAGGCAGTGGTGATACTAGCACTTCTGCCAAACAATTTAGGTTCACAAGCAAGCCATTGATTGAACAGACAAAGAAGGCTGCTTCTGAGACACTCTGCAATAAAATTCCTAAGCAAAATGTTACAATTCAGAGCCATAATGCCAAAGAAAGTAGAGATGATTCCTCAAATGGACCATCAAATTGTAATGACAATAGCTCCTTCCCTGCAATGGAAGCAGGTGAAAGAGTGGTTGCACAGCACCAATTGGATTTCCAGGCCATTCGAGAGAGGGAACTCAGGTTCACCGCTGCCGGTTGGAAGCGCGACTGCCATGGAAGGTGGTTTAAAGATGAAAACGTTGAATTTGACTCTGATGAAGAAGATCCAAACATCTGTCTTGCTTGA 495 0.4364 MHRKGSRHRAAESRFKERELRRQDEIKKRIALSDGSIGSGDTSTSAKQFRFTSKPLIEQTKKAASETLCNKIPKQNVTIQSHNAKESRDDSSNGPSNCNDNSSFPAMEAGERVVAQHQLDFQAIRERELRFTAAGWKRDCHGRWFKDENVEFDSDEEDPNICLA* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0515 164 PANTHER SODIUM CHANNEL MODIFIER 1 1 163 IPR033570 GO:0008380
Vvi3g0515 164 Pfam Acidic C-terminal region of sodium channel modifier 1 SCNM1 126 160 IPR031625 -
Vvi3g0515 164 MobiDBLite consensus disorder prediction 74 105 - -
Vvi3g0515 164 MobiDBLite consensus disorder prediction 10 31 - -
Vvi3g0515 164 MobiDBLite consensus disorder prediction 90 104 - -
Vvi3g0515 164 MobiDBLite consensus disorder prediction 36 56 - -
Vvi3g0515 164 MobiDBLite consensus disorder prediction 1 56 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0515 K24827 - vvi:100257210 327.02