Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0503 ATGGCAGACGATCTCTGTTTCTTCACCAAGGATTCCTTCGTCTTCAAGGCTCCTAAGAAATCTCCATTGGTGTTGAGGATGATTGTTTTGGTGTTTGCAATGGTTTGTGGGGTTTATATTTGCTCGATCTGTCTAAAGCAAATTAGCACCACAGCCACAGCTGGGTTCCTAAATGTCGAATTGACTGAAAGGCCGTGTGAGAAGCCTAATATTGAACCATCAGAAGTTCGTTATGTGCACTTCCCGAAACCCATATCCTATAGCAGGGCTGAATGTGCATGCAATCCTGTACGATATTTTGCCATCTTATCAACACAAAGATCTGGGAGCGGGTGGTTTGAGACCTTATTGAATAGCCATATCAACATTAGCTCAAATGGAGAGATTTTCTCTGTTAAAGTTAGAAGGAGCAATATTTCTTCAATCACAGAAACTTTGGATAAAATCTATAATCTAGACTGGCTCAGTAGTGCTTCCAAGAATGAGTGCACAGCTGCCGTTGGGCTGAAGTGGATGCTTAATCAGGGATTGATGCAGAATCATAAAGAGATAGTAGAATATTTCAACACGAGGGGTGTTTCATTGATTTTCCTCTTCAGAAGAAATCTGTTGAGGAGGATGATTTCAATGCTTGCCAATTCTTATGATCGAGAAGCCAAGCAACTAAATGGAACCCACAAGTCTCACGTACATTCACCTCGTGAGGCTGAGATACTTGCCCAATATAAGCCATCGATTAATGCAACTTTGCTGATACGGGATCTGAAGCAAGTAGAAGATACAGTTGCCAAAGCTTTACAGTACTTCAATAGCACCAGACACACAATTTTCTACTATGAGGATGTGATAAAAAACCGCACGAAACTGGTTGATGTTCTGAACTTTCTTAAAGTTCCACAAAGGGATCTTAGGAGTCGCCAAGTGAAGATACATAAAGGGTCGTTATCTGAACAGGTCGAGAACTGGGACGAAGTCCTAAAGACTCTCAAAGGAACCCAGTATGAAAGCTTCCTCCACGCTGATTATCAAATATGA 1035 0.4145 MADDLCFFTKDSFVFKAPKKSPLVLRMIVLVFAMVCGVYICSICLKQISTTATAGFLNVELTERPCEKPNIEPSEVRYVHFPKPISYSRAECACNPVRYFAILSTQRSGSGWFETLLNSHINISSNGEIFSVKVRRSNISSITETLDKIYNLDWLSSASKNECTAAVGLKWMLNQGLMQNHKEIVEYFNTRGVSLIFLFRRNLLRRMISMLANSYDREAKQLNGTHKSHVHSPREAEILAQYKPSINATLLIRDLKQVEDTVAKALQYFNSTRHTIFYYEDVIKNRTKLVDVLNFLKVPQRDLRSRQVKIHKGSLSEQVENWDEVLKTLKGTQYESFLHADYQI* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0503 344 Gene3D - 97 327 IPR027417 -
Vvi3g0503 344 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 343 - -
Vvi3g0503 344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0503 Vvi-Chr3 4300203 4305386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0503 - - vvi:100253782 681.789