Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0488 ATGGAGAGAGCCGCGCTGCTTCGCTCCATAACGTGTTCTACGCTCGCCTGCAACAGATTCTTCCTCCGCTCTTCTCATAGGCTATCTCTGCCCTCCGCTTCCTTCTCTTCCTCTCTCTCTCGCAGTCACCACCGTTCCTTTGGCACCCTCACTAGACGCTCCGTGCTCCGCCGTCACTGGCGATTGCTCCCCAGCTCCTCCTCGATTCCATCTACGCGATGTTTCTCTTCACTCTCCCCGAAAGCTATCGCCACTTCGCCAGAGCAAGCCTCTTCAGATGCTGTTGGAAGTCAAGATGATTTAGCTGAGAAGTACGGATTTGATAAAGTCTCAGAACAGTTTATCCAAGAATGTAAATCAAAGGCTGTGCTTTACAAACACAAAAAGACTGGTGCTGAAGTCATGTCTGTATCCAATGATGATGAGAACAAGGTTTTTGGGATTGTTTTTCGCACTCCTCCGAAGGATTCTACTGGGATTCCCCACATACTGGAGCATAGTGTATTGTGTGGATCAAGAAAGTATCCTTTAAAAGAACCATTTGTTGAATTATTGAAAGGGAGCTTGCACACATTTCTAAATGCATTCACATATCCTGATAGGACTTGCTATCCAGTTGCATCCACAAATACAAAGGATTTCTATAATTTGGTTGATGTATATCTGGATGCTGTCCTCTTCCCAAAATGTGTGGAGGACTTCCAGACCTTTCAACAGGAGGGTTGGCATTATGAGCTGAACAATCCTTCAGAAGATATATCATATAAAGGAGTCGTTTTCAATGAGATGAAAGGTGTTTACTCACAGCCCGATAATATATTAGGTCGGACAGCTCAACAGGCTCTGTTTCCAGACAATACCTATGGTGTTGATAGCGGAGGTGATCCAAAAGTTATTCCCAAACTCACGTTTGAGGACTTCAAGGAATTTCACCGTAAATATTACCACCCTGGCAATGCTAGGATATGGTTTTATGGAGATGATGATCCAAATGAGCGGCTACGCATCCTGAATGAGTATCTAGATTTGTTTGATACAAGTCCAGCTTCCAGTGAATCAAAGGTTGAACCACAAAAACTATTTTCAAACCCAGTCAGGATTGTTGAGAAATATCCTGCTGGAAAAGGTGGTGATCTGAGAAAAAAGCACATGGTATGCCTTAATTGGTTGCTCTCGGATAAGCCGTTAGACTTGGAAACTGAACTTACCCTTGGGTTTTTGGATCATCTTATGTTGGGAACTCCTGCTTCTCCATTGAGGAAAATTTTATTGGAAAGTGGTCTGGGAGATGCTATTGTTGGTGGTGGGATGGAAGATGAGCTCCTTCAACCCCAGTTTAGTATTGGGTTGAAGGGTGTTTCTGAAGATGACATTCATAAGGTAGAAGAATTAGTCATGAGTACGCTTAAAAGTTTAGCAAAGGAAGGCTTTAATTCAGAGGCTGTGGAGGCATCCATGAATACAATTGAGTTCTCTCTCAGGGAAAATAACACTGGATCATTTCCTCGTGGCTTGTCCTTGATGCTTCGCTCCATTGGGAAATGGATATATGATATGGATCCTTTTGAGCCATTGAAATATGAGAAACCTTTAATGGCCTTAAAAGCGAGAATAGCTGAGGAAGGTTCTAAAGCTGTGTTTTCTCCTTTGATAGAGAAATACATCCTGAACAATCCTCATTGTGTCACTGTTGAAATGCAGCCTGACCCAGAGAAAGCTTCTCGTGATGAAGCAGTTGAGAGAGAAATTCTGGAGAAAGTCAAGGCAGGTATGACAGAAGAAGATCTTGCTGAGTTAGCACGTGCTACACAGGAGCTACGATTGAAGCAGGAAACTCCTGATCCACCAGAAGCTTTAAAAAGTGTACCAAGCCTTTCTCTACTCGACATCCCCAAGGAACCTATCCATGTTCCCATAGAGATTGGAGTCATCAATGATGTCAAAGTTTTGCGACATGACCTCTTCACAAATGATGTCCTTTACACTGAGATTGTCTTTGATATGAGTTCACTAAAGCAAGACCTTCTTCCCTTGGTACCTCTTTTCTGTCAATCTTTGATGGAGATGGGTACAAAAGATATGGACTTTGTGCAACTAAATCAGTTAATTGGGAGGAAAACTGGAGGAATATCGGTTTATCCTTTCACTTCGTCTGTACGGGGGAAGGAATATCCTTGTAGCCACATAATTGTTCGGGGAAAAGCCATGGCAGGATGTGCAGAAGACCTATTTAACTTGGTTAATTGCATTCTTCAAGAAGTTCAATTCACAGACCAACAACGTTTTAAGCAGTTTGTTTCCCAAAGCAAAGCAAGAATGGAGAACCGATTAAGAGGCAGTGGCCATGGAATCGCAGCTGCAAGGATGGATGCAAAGTTGAATACTGCAGGGTGGATTGCTGAACAAATGGGTGGTGTTAGTTATTTGGAATTTCTGCAAGCTCTTGAAGAGAAAGTTGATCAGGATTGGATTGGGATCTCTTCATCTCTTGAGGAGATCCGCAAATCCTTACTTTCAAGGAAGGGTTGCTTGATAAACATGACATCTGAGGGAAAAAATCTTATGAACTCAGAAAAATACGTTAGCAAATTCCTTGATTTGCTTCCTGGCAGCTCTTCTGTTGAAAAAACTACTTGGAATGGTCGACTCTCTTCAGAAAATGAAGCTATTGTGATACCTACTCAGGTTAATTATGTTGGAAAAGCAACTAACATATATGACACCGGTTATCAACTCAAGGGCAGTGCATACGTAATTTCAAAATACATCAGTAATACATGGTTGTGGGATCGTGTGCGAGTTAGTGGTGGGGCCTATGGAGGTTTTTGTGATTTTGACACTCATTCAGGGGTATTCTCCTTCTTATCTTATCGAGACCCAAACTTGTTAAAAACACTTGATGTATATGATGGAACTGGGGATTTTCTACGTCAATTGGAAATGGATGATGATACTCTCACAAAAGCAATTATTGGGACCATAGGGGATGTAGATGCATACCAGCTACCTGATGCCAAGGGTTATAGTAGTTTGTTACGATACTTGTTGGGGGTAACAGAGGAAGAAAGGCAAAAGAGACGTGAAGAGATTTTGTCAACCAGTTTGAAGGACTTCAAGGAATTTGCAGATGCAATTGAGGCAGCTAAACATAAAGGGGTTGTGGTTGCAGTAGCATCTCCGGATGATGTTGATGCTGCAAACAAGGAGCATCCTAACTTCTTTCAAGTGAAGAAAGCCCTTTAA 3243 0.4228 MERAALLRSITCSTLACNRFFLRSSHRLSLPSASFSSSLSRSHHRSFGTLTRRSVLRRHWRLLPSSSSIPSTRCFSSLSPKAIATSPEQASSDAVGSQDDLAEKYGFDKVSEQFIQECKSKAVLYKHKKTGAEVMSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYLDAVLFPKCVEDFQTFQQEGWHYELNNPSEDISYKGVVFNEMKGVYSQPDNILGRTAQQALFPDNTYGVDSGGDPKVIPKLTFEDFKEFHRKYYHPGNARIWFYGDDDPNERLRILNEYLDLFDTSPASSESKVEPQKLFSNPVRIVEKYPAGKGGDLRKKHMVCLNWLLSDKPLDLETELTLGFLDHLMLGTPASPLRKILLESGLGDAIVGGGMEDELLQPQFSIGLKGVSEDDIHKVEELVMSTLKSLAKEGFNSEAVEASMNTIEFSLRENNTGSFPRGLSLMLRSIGKWIYDMDPFEPLKYEKPLMALKARIAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAVEREILEKVKAGMTEEDLAELARATQELRLKQETPDPPEALKSVPSLSLLDIPKEPIHVPIEIGVINDVKVLRHDLFTNDVLYTEIVFDMSSLKQDLLPLVPLFCQSLMEMGTKDMDFVQLNQLIGRKTGGISVYPFTSSVRGKEYPCSHIIVRGKAMAGCAEDLFNLVNCILQEVQFTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWIAEQMGGVSYLEFLQALEEKVDQDWIGISSSLEEIRKSLLSRKGCLINMTSEGKNLMNSEKYVSKFLDLLPGSSSVEKTTWNGRLSSENEAIVIPTQVNYVGKATNIYDTGYQLKGSAYVISKYISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSFLSYRDPNLLKTLDVYDGTGDFLRQLEMDDDTLTKAIIGTIGDVDAYQLPDAKGYSSLLRYLLGVTEEERQKRREEILSTSLKDFKEFADAIEAAKHKGVVVAVASPDDVDAANKEHPNFFQVKKAL* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0488 1080 Gene3D - 351 589 - -
Vvi3g0488 1080 Gene3D - 633 882 - -
Vvi3g0488 1080 FunFam presequence protease 1, chloroplastic/mitochondrial 89 349 - -
Vvi3g0488 1080 Pfam Insulinase (Peptidase family M16) 154 229 IPR011765 -
Vvi3g0488 1080 PANTHER PRESEQUENCE PROTEASE 106 1079 - -
Vvi3g0488 1080 Pfam Peptidase M16 inactive domain 301 488 IPR007863 -
Vvi3g0488 1080 Pfam Peptidase M16C associated 566 815 IPR013578 GO:0006508
Vvi3g0488 1080 SUPERFAMILY LuxS/MPP-like metallohydrolase 625 881 IPR011249 GO:0046872
Vvi3g0488 1080 SMART M16C_assoc_2 566 815 IPR013578 GO:0006508
Vvi3g0488 1080 Gene3D - 598 1052 - -
Vvi3g0488 1080 SUPERFAMILY LuxS/MPP-like metallohydrolase 887 1069 IPR011249 GO:0046872
Vvi3g0488 1080 SUPERFAMILY LuxS/MPP-like metallohydrolase 105 347 IPR011249 GO:0046872
Vvi3g0488 1080 FunFam Presequence protease 1 876 1052 - -
Vvi3g0488 1080 FunFam Presequence protease, mitochondrial 352 589 - -
Vvi3g0488 1080 SUPERFAMILY LuxS/MPP-like metallohydrolase 357 623 IPR011249 GO:0046872
Vvi3g0488 1080 Gene3D - 84 349 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0488 K06972 - vvi:100255619 2110.49