Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0485 ATGTGGCGCGATGGAGGCAAGCTCTACTGGGCCAGAAAGGAGGAGGCTGTCAAGGTTGAAGGAGTTGTCGTGATCTTCGCTTGGGCTTCGATTCAGGAGACCCACTTGAAGGAGTTTGTGGATCTCTACTCTTCTCTTGGATGGAATTCTCTTGTTTGTCACGCCGGTTTTCTCAACGCTTTCTTTCCTGAGAAGGCCACCTCGCTAGCATTTGTTGCTCTCAAGGAGCTTGTTGAGGAGCTGAGGATTAGACCATGTCCTATAGTCTTTGCAGCCTTTTCTGGTGGTCCAAAAGCTTGCATGTACAAGGTTTTTCAGATTATTGAAGGATCATGCGAAGCACACCTTCATGTGGATGATAGTCGATTGGTCAGAAATTGCATTTCTGGATACATCTATGATTCTAGTCCAGTAGATTTTACAAGTGATTTTGGTGCTCGATTTGGTCTGCCCCCCACCATTCTCAAAATGCCTGGTTCAACAAAACTAGTATCTTGGGTGGCAAAAGGTGTTGCTTCTGGTCTGGATGCTCTATATCTCACTAGGTTTGAGTTCCAACGTACTGAGTACTGGAGGACACTATACTCTTCGGTCGGTTTGGGAGCTCCTTTTCTCATTTTATGCTCCAAACATGATGATCTTGCTCCATATCAGATTGTTTGCAATTTTTCTCACCGTTTACAAGATCTTGGGGCTGATGTTAAACTTTTGAAATGGAATAACTCCCTTCATGCAGGTCATTACAGGCAATATCCAACTGAATACAAGGCTGCTGTGACTGAGCTCCTCAAGAAGGCAGCTTCAGTGCATCTCCAAAAAATCCAACTTGAAGGAGAAAGAGCAGGCATGGAGGGTGCACAGGATGAGATATCTGAGTTGATATGCAACCTCCAGAAAGCAGCAGTGAACTCAAACCAGAGCCTAAGAAGAGTTGCAATCGAGCCGAGTGACCACTTCTTCTTGCCAAGTTCAGCAGAGTATCAAAATGGTAGAGACTCTGGACCCTCACCTGATGAGCTGAAAGAAAGATCAGTCCCTGTGCCTGACCCCCCACGCATCAGTGCACATAGTGTTCTTGGGCAGTTCCTCTTTGATGTTTGTGTCCCTAAAAACATTGAAGGTTGGGATATTAAATTTTCTGGCTCTTTGAATGGGCAGCCGCTTGCTTCTGCTCGTAGGTATTCTCAGTATGTAAGCAAATGCACTCGTCGCTCAAGATTGTAG 1224 0.4551 MWRDGGKLYWARKEEAVKVEGVVVIFAWASIQETHLKEFVDLYSSLGWNSLVCHAGFLNAFFPEKATSLAFVALKELVEELRIRPCPIVFAAFSGGPKACMYKVFQIIEGSCEAHLHVDDSRLVRNCISGYIYDSSPVDFTSDFGARFGLPPTILKMPGSTKLVSWVAKGVASGLDALYLTRFEFQRTEYWRTLYSSVGLGAPFLILCSKHDDLAPYQIVCNFSHRLQDLGADVKLLKWNNSLHAGHYRQYPTEYKAAVTELLKKAASVHLQKIQLEGERAGMEGAQDEISELICNLQKAAVNSNQSLRRVAIEPSDHFFLPSSAEYQNGRDSGPSPDELKERSVPVPDPPRISAHSVLGQFLFDVCVPKNIEGWDIKFSGSLNGQPLASARRYSQYVSKCTRRSRL* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0485 407 Coils Coil 283 303 - -
Vvi3g0485 407 PANTHER UNCHARACTERIZED 17 268 IPR008547 -
Vvi3g0485 407 Pfam Eukaryotic protein of unknown function (DUF829) 128 375 IPR008547 -
Vvi3g0485 407 MobiDBLite consensus disorder prediction 323 349 - -
Vvi3g0485 407 SUPERFAMILY alpha/beta-Hydrolases 128 265 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0485 Vvi-Chr3 4192892 4198388 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0485 - - vvi:100245307 826.239