Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0476 ATGACTAGGTTTTGGAGTTCTTGGCACGGTGTGTGGAAGATATATACAAGGAAAGACTTGGAGGCGGCCATTGGTGACCAATTCATTTCAGTTGCAGAAATGTATCATGGACATTCTGACCATGAGAAGTATGGTGCAGGTGGGCATGTGGGTCATGCCACAGCTCCCGGATTCCAAAATCCTAGCCCAGCACCACCACCACGTTATGCTGCCCCGTATGTTGTACAGTATCCCGGCGGCACCATCCGCTGGTCTTCTGGTCTTTGCCACTGCTGTGATGATCCTGCAAACTTTTTGATCACTTGCGTTTGCCCTTGCATCACGTTTGGGCAGATTGCTGAGATAGTGAGCAAAGGATCCTCAAATTGTGCGGTGAGTGGTACGATCTATACGGTATTGTGTTTTATTGGTTTGCCGTGCTTGTATTCTTGTGTTTATCGTTCAAGATTGAGGGCTCAGTATGACTTGGAAGAGTCGCCTTGCGTTGATTGCCTGGTCCACTTCTTTTGTGAGGCATGTTCACTGTGTCAGGAGTACAGGGAGCTCAAGAGCCGTGGATTTGACATGGGGATAGGTTGGGAAGCCAATGCTGATAGACAAAGACGGGGAATTACAGTACCTCCGGCGGTGGCTCAAGGCATGAACAGATGA 651 0.49 MTRFWSSWHGVWKIYTRKDLEAAIGDQFISVAEMYHGHSDHEKYGAGGHVGHATAPGFQNPSPAPPPRYAAPYVVQYPGGTIRWSSGLCHCCDDPANFLITCVCPCITFGQIAEIVSKGSSNCAVSGTIYTVLCFIGLPCLYSCVYRSRLRAQYDLEESPCVDCLVHFFCEACSLCQEYRELKSRGFDMGIGWEANADRQRRGITVPPAVAQGMNR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0476 216 PANTHER DUF614 FAMILY PROTEIN-RELATED 83 191 IPR006461 -
Vvi3g0476 216 Pfam PLAC8 family 84 181 IPR006461 -
Vvi3g0476 216 NCBIfam uncharacterized Cys-rich domain 83 183 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0476 Vvi-Chr3 4061081 4066802 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0476 - - vvi:100253696 382.489