Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0463 ATGGGTGATTGTCCTTGGTGTGACCACTGTCAGAAACGAGGCCACACAAAAGATACATGCTGGAATATCCACAGGAAGCTGCCTACTGGGAGAAACTTGAGACCTAACCACAATTCAAAAGCCTACCACGGTGGATTTATACCAGTTAGTCAGGCATTCACATTGGTGGAGGCCTGCAAGCCAATCATAATGGTATTGATGGACCTGGAGACCAAGACAATTTCCAAACCCAAAATTGCAGTCAAGGTTTCCCTACCTTCATCCCATTTCTTAAGCTGTAGCATAGTATCTCTATCTATATATACTCACAGTTCCATTAATGAGAAATCAGAACACAAAAGAATGGGTATTACTACTTCCCTCTCATATCTGTTGTTCTTCAACATCATCCTCCCAACCTTAACGGCTTCTCCAATATTGTTTCAGGGGTTCAATTGGGAATCATCCAAAAAGCAAGGAGGGTGGTACAACTTCCTCATCAACTCCATTCCTGAACTATCTGCCTCTGGAATCACTCATGTTTGGCTTCCTCCACCCTCTCAGTCTAATGCATCCGAGGTTGGAAATGTTAAAGTGAATGGAAAGGCATTAAAAAGTAAAGAACTTTGTGATACTTCGAAGGTTGAATATGTTAATCTACTTAACTCAATTGATCTTCAAAATATATAA 669 0.4081 MGDCPWCDHCQKRGHTKDTCWNIHRKLPTGRNLRPNHNSKAYHGGFIPVSQAFTLVEACKPIIMVLMDLETKTISKPKIAVKVSLPSSHFLSCSIVSLSIYTHSSINEKSEHKRMGITTSLSYLLFFNIILPTLTASPILFQGFNWESSKKQGGWYNFLINSIPELSASGITHVWLPPPSQSNASEVGNVKVNGKALKSKELCDTSKVEYVNLLNSIDLQNI* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0463 222 Gene3D Glycosidases 130 208 - -
Vvi3g0463 222 SUPERFAMILY (Trans)glycosidases 138 183 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0463 Vvi-Chr3 3992899 4010034 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0463 119 186 Glycoside Hydrolase AT4G25000 60.274 7.78e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0463 K01176 - vvi:100245165 148.288