Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0462 ATGGCCATCTTTGAAGGAGGAACCCCAGATGATCGCCTTGACTGGACCCCATCTTTCCTTTGCAAGGACGACACTCCTTATTCCGACGGCACCGGAAACCCTGATTCTGGAGATGACTACAGTGCCGCACCAGACATCGACCACATCAACCCACGGGTTCAGCAAGAGCTAATAGACTGGATGAACTGGCTGAAGATTGAAATAGGGTTTGATGGATGGCGATTTGATTTTGCTAGAGGATTCTCCCCAGCTTTTACCAAGTTTTATATGGCAAAGACCAGGCCAAAATTTGCAGTAGGGGAAATTTGGAAGTCTCTTTCTTACAGAAGTGATGGTAAGCCAAACTACAACCAAGATAGTCATCGGCGTGAGCTTGTGGAATGGGTGAGAGGCGCTGGAGGAGCAGTGAATGCATTTGATTTTACAACCAAAGGGATACTCCAAGCTGCAGTGGAAGGGGAACTGTGGAGAATGAAGGATTTGAATGGAAAGCCCCCAGGAATGATTGGGTTAATGCCTGGAAATGCTGTGACTTTCTTAGATAATCAATGA 552 0.4674 MAIFEGGTPDDRLDWTPSFLCKDDTPYSDGTGNPDSGDDYSAAPDIDHINPRVQQELIDWMNWLKIEIGFDGWRFDFARGFSPAFTKFYMAKTRPKFAVGEIWKSLSYRSDGKPNYNQDSHRRELVEWVRGAGGAVNAFDFTTKGILQAAVEGELWRMKDLNGKPPGMIGLMPGNAVTFLDNQ* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0462 183 SUPERFAMILY (Trans)glycosidases 12 182 IPR017853 -
Vvi3g0462 183 Gene3D Glycosidases 1 183 - -
Vvi3g0462 183 PANTHER ALPHA-AMYLASE 3 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0462 Vvi-Chr3 3988607 3989158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0462 4 183 Glycoside Hydrolase AT4G25000 64.641 4.51e-83 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0462 K01176 - vvi:100250317 386.726