Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0452 ATGAAGTGTCTGAGTCTATCGCCGCTTCTCTCACCACCTTCTTTGAGCTTCTCTTCTTCCATCAAGACCCCATTTCTGGTGGCTCTCACCTCCACGCCCTCAAAAACACATACTCCCAAACGCTCCTCGAAATCCGCTAAAACTCTCTTTCCAACCACCACCACCTCTCTTCCTCCCAAAAAGGTTCTGGTGCCTATTGGATATGGAACGGAGGAAATGGAAGCGGTTATTCTAGTCGACGTTCTGCGGCGAGCTGGTGCGAACGTGGTTGTGGCGTCGGTGGAACCCCAGCTCGAGATTGAGGCTTCTAGCGGCACCAGACTGGTTGCTGATACCTCCATCTCAACATGCTCTGATGAAATTTTTGATCTCATAGCTTTGCCGGGAGGAATGCCGGGCTCTGCACGATTGAGGGATAGTGAAATTCTCCGGAAAATTACTAGCAAACACGCTGAGGAAAAAAGGCTGTATGGTGCTATATGTGCTGCTCCAGCCATTACACTTCAACCATGGGGCCTTCTGAGAAGAAAACAGATGACTTGTCACCCAGCATTCATGGACAAGCTTCCAACCTTCAGGGCTGTTAAATCAAATCTACAAGTTTCTGGGGAGCTCACAACAAGCAGAGGCCCCGGAACTGCTTTTGAGTTTGCTTTAGCATTAGTTGATCAACTTTTTGGAGAGTCTGTAGCCAAGGAGGTTGGAGAATTGTTGCTGATGCGTACTGCTGAGGACAATCATAAAAAGGAAGAGTTTAATGAAGTTGAATGGTCAGTTGATCATAGTCCTCATGTTCTTGTCCCAGTTGCAAATGGTTCTGAAGAAATTGAAGTGGTTACAGTTGTAGATATTCTACGGCGAGCAAAGGTGGATGTTGTGGTTGCTTCAGTTGAGAAATCTTTGCAGATTTTAGCATCTCGAGGCATTAAACTTATAGCTGACAAGTCAATTGATAATGCTGCTGAATCAATTTATGACTTGATCATTCTTCCGGGGGGGATTGCTGGTGCTGAGCGGCTGCACAAATCCAAGGTTCTGAAGAAGATGCTCAAAGAACAAGGATCAGCAGGAAGAATATATGGAGCAATCTGCTCCTCGCCAACAGTCTTACATAGACAAGGGTTACTCAAGGGTAAAAGAGCCACCGCTCATCCCTCTGTAGCTAGCAAGCTCACCAATGAAGTAGTGGAGGGAGCTAGGGTAGTTATTGACGGCAAGCTGATTACAAGCAGGGGGCTTGCAACTGCAATAGAATTTGCATTGGCAATTGTTAGCAAGCTTTTTAGTCATGCAAGAGCAAGGAGTGTAGCTGAAGGTCTTGTTTTTGAGTACCCTAAGAGCTAG 1344 0.4635 MKCLSLSPLLSPPSLSFSSSIKTPFLVALTSTPSKTHTPKRSSKSAKTLFPTTTTSLPPKKVLVPIGYGTEEMEAVILVDVLRRAGANVVVASVEPQLEIEASSGTRLVADTSISTCSDEIFDLIALPGGMPGSARLRDSEILRKITSKHAEEKRLYGAICAAPAITLQPWGLLRRKQMTCHPAFMDKLPTFRAVKSNLQVSGELTTSRGPGTAFEFALALVDQLFGESVAKEVGELLLMRTAEDNHKKEEFNEVEWSVDHSPHVLVPVANGSEEIEVVTVVDILRRAKVDVVVASVEKSLQILASRGIKLIADKSIDNAAESIYDLIILPGGIAGAERLHKSKVLKKMLKEQGSAGRIYGAICSSPTVLHRQGLLKGKRATAHPSVASKLTNEVVEGARVVIDGKLITSRGLATAIEFALAIVSKLFSHARARSVAEGLVFEYPKS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0452 447 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 59 239 - -
Vvi3g0452 447 SUPERFAMILY Class I glutamine amidotransferase-like 59 245 IPR029062 -
Vvi3g0452 447 CDD GATase1_DJ-1 265 427 - -
Vvi3g0452 447 SUPERFAMILY Class I glutamine amidotransferase-like 264 443 IPR029062 -
Vvi3g0452 447 Pfam DJ-1/PfpI family 265 425 IPR002818 -
Vvi3g0452 447 Pfam DJ-1/PfpI family 60 224 IPR002818 -
Vvi3g0452 447 Gene3D - 257 446 IPR029062 -
Vvi3g0452 447 Gene3D - 53 255 IPR029062 -
Vvi3g0452 447 FunFam Protein DJ-1 homolog C 257 445 - -
Vvi3g0452 447 NCBIfam DJ-1 family protein 61 235 IPR006287 -
Vvi3g0452 447 NCBIfam DJ-1 family protein 265 438 IPR006287 -
Vvi3g0452 447 MobiDBLite consensus disorder prediction 32 51 - -
Vvi3g0452 447 CDD GATase1_DJ-1 62 225 - -
Vvi3g0452 447 FunFam Protein DJ-1 homolog C 54 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0452 Vvi-Chr3 3882126 3886462 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0452 - - vvi:100258951 812.372