Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0451 ATGCACAGAAAAAGAAAGATGCTGAGGGTATTGGGAAGAAGAGCATCCACGTCTCATCAATGGCGAAATCCGGTATCACTTCTCCAGAAATGTCAGTTCTGCATAGGAGTGCTTCCCGACGGCGTCGATCGTCAATCTCCTTCCTTCTCTCAGAACTCCGCTATCATGAACGATTACATTTCCGAACTCAAATCGCATGTCCAAAAGGTGCTTGGCGGAGGAGGAGCAGAATCTGTGAGGAGGAACCGGAGCAGGAACAAACTTCTCCCTAGAGAGAGAATCGATCGCCTGCTTGACCCTGGCTCTTCATTTCTTGAGCTTTCTCAGCTTGCAGGCCATGAGCTATATGAAGAACCTTTACCATCTGCTGGGATAATCACTGGAATAGGACCTGTGCATGGGCGACTTTGTATGTTTGTGGCTAATGACCCTACTGTAAAGGGAGGAACTTACTATCCCATCACTGTTAAGAAACACCTTAGGGCACAAGAGATTGCTGCTCAATGTAAATTACCGTGCATATACCTTGTTGATAGTGGAGGTGCTTACCTTCCAAAGCAGGCTGATGTCTTTCCTGACCGGGATAACTTTGGTAGAATTTTCTATAATGAAGCACAAATGTCTGCAGAAGGTATTCCTCAAATTGCTCTGGTATTAGGTTCTTGTACTGCTGGTGGTGCTTATATACCTGCAATGGCGGATGAAAGTGTTATGGTCAAAGGAAATGGTACCATATTTCTAGCTGGGCCTCCACTTGTGAAGGCTGCTACAGGAGAAGAAGTCTCTGCTGAGGATTTGGGAGGTGCAACTGTGCATTGCAAAACATCAGGGGTTTCAGATTATTTTGCTCAAGATGAATTGCATGGACTTGCTATTGGGAGGAACATTATCAAGAATTTCCACATGGCTGGAAAACTGGGGATTGTAAATGAATTGCAAAATATTATTCCTGAATTTAAAGAACCAGTTTATGATGTAAAGGAGCTCCGTTCAATTGCACCAGCAGACCACAAGCAGTCTTTTGACATCCGATCAGTTATTGCTCGCATTGTTGATGGAAGCGAATTTGATGAATTCAAGAAATTGTATGGAACTACTCTTGTAACAGGTTTTGCTAGAATTTTTGGACAACCTGTGGGCATAATCGGAAACAATGGGATATTATTTAATGAATCTGCTCTAAAAGGGGCCCATTTCATTGAAATATGTACTCAACGCAACATTCCTTTGGTGTTTCTTCAGAACATCACTGGATTTATGGTTGGTTCAAGATCTGAGGCAAATGGGATAGCAAAATCTGGAGCGAAGATGGTGATGGCAGTTTCTTGTGCAAAGGTTCCTAAAATTACTATTATTGTTGGCGGAAGCTTTGGTGCTGGAAATTATGCAATGTGTGGGCGTGCATATAGTCCCAATTTCATGTTCCTTTGGCCAAATGCCAGAATATCCGTGATGGGTGGTGCTCAGGCTGCTGGTGTGCTTTCTCAAATAGAAAGAGGCAACAAGAAAAAGCAAGGAATCCAGTGGCCAAAGGATGAAGAAGAAGCATTCAAGGCAAAGGTGGTGGAGGCATACGAGAAAGAGGGAAGCTCCTATTACTCAACTGCAAGACTCTGGGACGACGGCATCATTGATCCAGCAGACACAAGAAAAATCATAGGTCTCTGTATCTCTGCAACCACCACCAACCATGCCCCAGAAGATACCAAGTATGGTGTATTTAGAATGTGA 1731 0.4367 MHRKRKMLRVLGRRASTSHQWRNPVSLLQKCQFCIGVLPDGVDRQSPSFSQNSAIMNDYISELKSHVQKVLGGGGAESVRRNRSRNKLLPRERIDRLLDPGSSFLELSQLAGHELYEEPLPSAGIITGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCKLPCIYLVDSGGAYLPKQADVFPDRDNFGRIFYNEAQMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGEEVSAEDLGGATVHCKTSGVSDYFAQDELHGLAIGRNIIKNFHMAGKLGIVNELQNIIPEFKEPVYDVKELRSIAPADHKQSFDIRSVIARIVDGSEFDEFKKLYGTTLVTGFARIFGQPVGIIGNNGILFNESALKGAHFIEICTQRNIPLVFLQNITGFMVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIERGNKKKQGIQWPKDEEEAFKAKVVEAYEKEGSSYYSTARLWDDGIIDPADTRKIIGLCISATTTNHAPEDTKYGVFRM* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0451 576 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 56 312 IPR011762 -
Vvi3g0451 576 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 318 576 IPR011763 GO:0016874
Vvi3g0451 576 PANTHER ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED 27 576 IPR045190 -
Vvi3g0451 576 FunFam Methylcrotonoyl-CoA carboxylase subunit beta 36 306 - -
Vvi3g0451 576 Gene3D - 314 576 - -
Vvi3g0451 576 SUPERFAMILY ClpP/crotonase 59 297 IPR029045 -
Vvi3g0451 576 Pfam Carboxyl transferase domain 82 565 IPR034733 -
Vvi3g0451 576 SUPERFAMILY ClpP/crotonase 318 566 IPR029045 -
Vvi3g0451 576 Gene3D - 35 305 - -
Vvi3g0451 576 FunFam Methylcrotonoyl-CoA carboxylase beta chain 314 576 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0451 7 576 Acyl Lipid Metabolism Gene Families AT4G34030 77.211 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0451 K01969 - vvi:100253805 1150.58