Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0443 ATGGGTTTCATTTCAACGCTGTTCATTGCAGCTTTTCTCTTGGACTCTGCTTTTGCTCTCAAGCTGGGACAGACATGCGTGTCGGATGGAAACTGCGACTCAGGTTTGCACTGCGAAACGTGCCTCGCGAACGGAAACGTTCGGCCCAGATGCACGCGTACAAGGCCTGTGAACCCTACTTCAAAGGTAAAGGGTCTGCCTTTTAATAGGTATTCGTGGTTGACGACTCACAATGCTTTTGCTAAGTTGGGGGCGAAGTCGGCGAGTGGGTGGCCGATACTGACTCCGACGAACCAGCAAGACTCCATTACCAGTCAGCTCAATAATGGTGTCAGAGGGTTGATGCTCGATATGTATGACTTTGACAATGACATCTGGTTATGTCACTCCTATGGTGGTCAGTGCTACAACTACACCGCTTTTCAACCTGCCATTAATGTTCTGAAAGAAGTTCAAGTGTTTCTTGAAGCAAACCCATCAGAGATTGTCACCATTATCATAGAAGACTATGTCACATCACCCAAGGGCCTGACCAATGTGTTTAATGCCGCTGGCCTGAGGAAGTTCTGGTTTCCAGTATCTCGAATGCCAAGAAATGGTGGAGATTGGCCAACAGTAGAGGACATGGTCGAAAAAAATCAGCGGTTGGTGGTTTTTACCTCAAAAGCAGCTAAGCAGGCTTCTGAAGGGATTGCTTATGAGTGGAGATACCTAGTAGAAAACCAATATGGCAATGGTGGAATGAAAGCTGGATCATGTCCAAATCGCGGCGAGTCATCTCCCATGAACAACACAAAGACAAAGTCACTAGTCTTAATGAACTATTTCCCAGACGGACCAGATGTGACCCAAGCTTGTAAGCATAATTCAGCTCCATTAATTAGTATGTTGAACACTTGCCATGAAGCAGCAGGTAAAAGATGGCCAAACTTCATTGCAGTAGATTTTTACAAGAGAAGTGATGGAGGAGGAGCCCCAGAAGCTGTAGATTTGGCAAATGGGCAACTAGTGTGTGGGTGTGGAAACATTGCCTATTGCCAGGCAAACATGACGTTTGGCAAATGTGAGCTACAGAAGCCTGTTGTTGCCTCTACACCAGGACCGGTGGCTCGTGATTCCAGTTTTGCTAATCCAGTTAGCAGACCACTTCAACTTCTGTGGTTGATGGTAGTTTTGGTGGTATCCATCTTATAA 1194 0.4623 MGFISTLFIAAFLLDSAFALKLGQTCVSDGNCDSGLHCETCLANGNVRPRCTRTRPVNPTSKVKGLPFNRYSWLTTHNAFAKLGAKSASGWPILTPTNQQDSITSQLNNGVRGLMLDMYDFDNDIWLCHSYGGQCYNYTAFQPAINVLKEVQVFLEANPSEIVTIIIEDYVTSPKGLTNVFNAAGLRKFWFPVSRMPRNGGDWPTVEDMVEKNQRLVVFTSKAAKQASEGIAYEWRYLVENQYGNGGMKAGSCPNRGESSPMNNTKTKSLVLMNYFPDGPDVTQACKHNSAPLISMLNTCHEAAGKRWPNFIAVDFYKRSDGGGAPEAVDLANGQLVCGCGNIAYCQANMTFGKCELQKPVVASTPGPVARDSSFANPVSRPLQLLWLMVVLVVSIL* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0443 397 CDD PI-PLCc_At5g67130_like 58 333 - -
Vvi3g0443 397 Gene3D Phosphatidylinositol (PI) phosphodiesterase 59 324 IPR017946 GO:0006629|GO:0008081
Vvi3g0443 397 PANTHER UNCHARACTERIZED 23 347 - -
Vvi3g0443 397 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 67 175 - -
Vvi3g0443 397 SUPERFAMILY PLC-like phosphodiesterases 65 337 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0443 Vvi-Chr3 3812983 3816356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0443 - - vvi:100252205 800.045