Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0439 ATGAATTCTCGGGCTTTGGCAGCTCTACTGTCGTCTCTAATTTCAGAACTCCTCCTTCTCCTCCTCCTCCTCTTCCCTTCCTCTAACCCCCTCACCATAACTTCCAATTCTAATTCCGGTTCCAATTTCTATGAAACCATTTTCCCTCTGATTCACCATTTCCTCTCTTCCGCGGAGCTTGTTACCTCTCTGTCTCTCCTCTCCATTTCCAGGAAACGCAAGAGGACCCACCAGCCAGACCTCGACAACGAGGACGAAGAGGATGAACCCGGCTCAGAACTCGCCCGATTCGAACTGGGTTTGACTCAGAACCCTGACTCGTTCAAGGGTTGTTTCAGAATGACCTCCTCCACTTTTGAGTGGCTGTCTGGCCTGCTCGAGCCATTGCTCGATTGTCGCGACCCAATTGGCTCTCCCCTCAATCTCGCCCCCGAAATTCGACTCGGAATTGGGCTTTTCCGGTTGGCCACCGGCTCCGATTACCCCGAAATCGCTCGCCGATTCGGGGTTTCCGAGTCCATAACCCGGTTCTGTGTCAAACAGTTGTGCCGCGTTCTCTGCACCAATTTCAGATTCTGGATCGCTTTTCCTAGCCCAATTGATCTCGATTCCTTGTCCACGAGCTTCGAAGCTCTCACCGGATTGCCCAATTGTTGTGGCGTAATTGATTGTACTCGGTTCAAGATTGTGAGAAATAATGGGTTCAAGCTATCTCCCAAAGAGGAGGTTCGTGAAGAGAGCATTGCTGCCCAAATTGTGGTTGATTCATCATCCCGAATCCTAAGCATTGTTGCTGGGTTTCGTGGTGATAAGGGCGAATCTCGGGTCCTTAAATCCTCAACTCTGTACAAAGACATTGAAGGAGGAAGTTTATTGAATGCTCCCCCAGTTTATATGAATGGGGTTGGTATAAATCAGTACTTGATCGGCGATGGAGGATACCCTTTGCTTCCCTGGTTGATGGTACCTTTCGTTGATCCAGCTCCTGGTTCATATGAGGAGAATTTCAATTCAGCACACCATTTGATGCATATTTCAGCCCTCAGAGCAATCGCTAGTTTGAAGGACTGGGGTGTCCTGCGCCAAACTATAGAGGGGGAGTTCAAGATGGCTGTTGCCTATATTGGGTCGTGTGCAATACTTCATAACGTTTTGCTTATGAGGGATGACTATTCGGCATTGTCGGACGGGTTGGGGGATTACAGTCAGAGCCCTCAGTATTGTAGGAATGCCAGCTTGGAGGAGAGCCCAATTGAGAGGAATGCTTCTGTTATTAGAAATGCTTTAGCTACCAGAGCGAGAAAGTTTCATTCTTCCAGCCACTCTATGGACCCTGGTGGTTCTGTGAAAGCAGAGCCCCGGTGA 1365 0.4916 MNSRALAALLSSLISELLLLLLLLFPSSNPLTITSNSNSGSNFYETIFPLIHHFLSSAELVTSLSLLSISRKRKRTHQPDLDNEDEEDEPGSELARFELGLTQNPDSFKGCFRMTSSTFEWLSGLLEPLLDCRDPIGSPLNLAPEIRLGIGLFRLATGSDYPEIARRFGVSESITRFCVKQLCRVLCTNFRFWIAFPSPIDLDSLSTSFEALTGLPNCCGVIDCTRFKIVRNNGFKLSPKEEVREESIAAQIVVDSSSRILSIVAGFRGDKGESRVLKSSTLYKDIEGGSLLNAPPVYMNGVGINQYLIGDGGYPLLPWLMVPFVDPAPGSYEENFNSAHHLMHISALRAIASLKDWGVLRQTIEGEFKMAVAYIGSCAILHNVLLMRDDYSALSDGLGDYSQSPQYCRNASLEESPIERNASVIRNALATRARKFHSSSHSMDPGGSVKAEPR* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0439 454 PANTHER UNCHARACTERIZED 65 405 - -
Vvi3g0439 454 Pfam DDE superfamily endonuclease 222 383 IPR027806 -
Vvi3g0439 454 MobiDBLite consensus disorder prediction 435 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0439 Vvi-Chr3 3739263 3740627 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0439 - - vri:117911639 854.358