Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0436 ATGGTTGACACAAAAATCCTGATTTTTGACTCCACTAGCTACATACATATTTTTTCAAACCGCCATTCTCCTTTCTTTCTTAGCTGGCAGCTCCGCTCTCTCATGGGGTCGCCAGAGATCGAGAGAGATGAACCAGTGACGCCGGCCGGCCGGCTATTTCTCCGGCCAGAAATGGACCAGGTCATCAATTGTGTTATTGGAGCCGAAAATCCCTTTGATGTGGACGCCCTGAAAAAGGAGATCACCAACTCAATGATGCTGAAGCACCCTAGATTCTGTAGCCTCATGGTCAGGGATCGCCATGGAAGAGAGTACTGGAGAAAAACCGAAATCGACATCGACCGCCACATCATCATCCTGAATGACTCCCTCGACGGCGATAACGACGAAGATGCCGTCAATGGTTATTTAGCCGATCTGTCGGTTTCGTCTCCTCTCAGCACCGATAAACCTTTATGGGAAATTCACCTCCTGACGGCCCACAAGTGTGCTGTTGTTCGAATCCATCACGCCTTGGGCGATGGGATCTCCCTCATGTCACTGCTTCTCGCCTGTTTCCGGCGGTCCGATTGTCCTGATCAGCTGCCCACCATGGGCTCCTCCAGCCAGCCGAAACCGAGGAACAGCAGGAGACGCAATCGGCTGAGGGAGCTACTGAACATAGCATGGTTTACCTTGGTATTTGTGGTGGAGTTCATACTAAGGAGTTTGTGGGTCAAGGACCGGAAAACAACAATCTCCGGTGGCGCCGGTGTGGAGCTGTGGCCGCGAAAGTTGACGACGGCGAAGTTCCTGCTAGATGACATGAAGACGGTCAAGAATGCGATTCCCAACGGGACCATTAATGATGTTCTTTTCGGGGTGATATCAGCTGGGCTATCTAGATACTTGGATCATCGAGCACCAAATAAATTGCGGGAGGGGATTCAAATGACGGGGGTGGCCATGGTCAACTTAAGAAAACAGCCAGGGTTGCAGGAAATGGCGGAGTTGATGCAAAGCAAGGCAGGATCCCGGTGGGGTAACAAGTTCGGTATGCTGCTCCTGCCTGTTTATTATCATAAGGGCCTTGTTGGTCCTCTAGACTATATCAAGAAAGCTAAGACAATGATCGATAGAAAGAAACAGTCTTTAGAGGCTTACTTCTCATACAAAATTGGCTACTTTGTAATGAACTTCTTGGGATCAAAGATCGCTTGCGTGCTTAATTACAGGATTGTCTGCAACACCACTTTCACAATCTCAAATGTTCTTGGCCCAGGAGAGGAAATCACAATTGTGGGCAACCCTGTCACTTACATAAGGGCCAATTCCACGGCCTTACCCCATGCAATCACAATGCACATGGTGAGCTACGCAGGAAGGGCTGACTTGCAAATCCTTGTCGCCAAAGACATCATCCCGGACCCGAAATTTCTGGCCAAGTGCTTCGAGGAGGCCTTGCTCGAAATGAAGGAAGCGGCAGCAGAAGCCACAAGTAGAAGCTAG 1488 0.4973 MVDTKILIFDSTSYIHIFSNRHSPFFLSWQLRSLMGSPEIERDEPVTPAGRLFLRPEMDQVINCVIGAENPFDVDALKKEITNSMMLKHPRFCSLMVRDRHGREYWRKTEIDIDRHIIILNDSLDGDNDEDAVNGYLADLSVSSPLSTDKPLWEIHLLTAHKCAVVRIHHALGDGISLMSLLLACFRRSDCPDQLPTMGSSSQPKPRNSRRRNRLRELLNIAWFTLVFVVEFILRSLWVKDRKTTISGGAGVELWPRKLTTAKFLLDDMKTVKNAIPNGTINDVLFGVISAGLSRYLDHRAPNKLREGIQMTGVAMVNLRKQPGLQEMAELMQSKAGSRWGNKFGMLLLPVYYHKGLVGPLDYIKKAKTMIDRKKQSLEAYFSYKIGYFVMNFLGSKIACVLNYRIVCNTTFTISNVLGPGEEITIVGNPVTYIRANSTALPHAITMHMVSYAGRADLQILVAKDIIPDPKFLAKCFEEALLEMKEAAAEATSRS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0436 495 PANTHER O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN 43 492 IPR045034 GO:0008374|GO:0045017
Vvi3g0436 495 SUPERFAMILY CoA-dependent acyltransferases 41 182 - -
Vvi3g0436 495 Pfam Wax ester synthase-like Acyl-CoA acyltransferase domain 100 284 IPR004255 GO:0004144|GO:0045017
Vvi3g0436 495 Pfam WS/DGAT C-terminal domain 340 485 IPR009721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0436 Vvi-Chr3 3675715 3678053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0436 39 490 Acyl Lipid Metabolism Gene Families AT5G53390 35.865 1.04e-92 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0436 - - vvi:100255489 960.288