Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0434 ATGCAAGAATCTGAAATTATGGACCATAAGACATGGCTTTGGAGGAAAAAATCCTCCATGAAGACAATTGTTGCAAGTGACAAACCTGAAATGTATTTGGAAGGACATGAAGAAGAGATGCCTCTAACAGAGACATTAGGTCTAGAGGGATCCATGAAAAACCTAAATGAGAAGCTTGCTGCTGTTGTGGATGAATCTAAAACTAAAGACGATCTTGTGACCAAATATGCAAGAATGGCAGAAGAAGCCATTGCAGGTCGGGAGAAGGCAGAAGCAGAAGCATTGTCTTTGAAACAAGAATTAGATGAAGCGTTAAATCTGGGTGTAGCTGCAAAAGAAAGGTTAAGTCACTTGGATGCTGCACTGAAGCAATGTATGCAGCAGTTAACTTCTCTAAAAGAAGAACAGGAGCAAAGAATTCGTGATGCTGTTATGAAGACATTGAGAGAATTTGAAAAGACACAGAAAAACTTAGAAGATAATTTAACAGAAACAAGTAAAAGGCTTACAGACTTAACTGTTGAGAATACTCATCTGAGTAAGGCCCTTCTAGCCAAAGAGAAATTGATTGAAGATCTATGTAAAATAAAGTCCCAGGCAGATACAGAATTCAAGGCACTAATGGCTAGACTAGATTCCACAGAGAAAGAAAATGCTTTTCTAAAATATGAGTTTCGCATGCTTGAGAAGGAGCTTGAGATCCGGAATGAGGAGAGGGAATTTAACAGGAGATCTGCTGAGGCAATACACAAGCAACACTTGGAGAGTGTGAAGAAAATTGCAAAGTTAGAAGCAGAATGCCAGAGATTACGTCTCCTAGTGCGAAAGAGACTTCCAGGTCCTGCTGCTGTGGCAAAGATGAAGAGTGAAGTTGAAACGCTGGGAAGAGATCAGACAGAGATGAGGAGAAAAAAGTTGAATCCCATGACAGGAGGTTTGATCGCCAGAGATGGCCTTGTGGAAAAGTCTTCTGAAATTCCCAGTAAGAAGATGAGTTTCCTTATCGAGCGGTTATGTGAAGTGGAAGAAGAAAACAAAACTCTAAAAGAAATTCTAGCCAAGAAAAACAATGAACTCCATTCACCAAGACTTTTGTGTGCTCGAACACCCTCTAGATTTGGACAGCCTGAAGCTCAGCTTGGGGAGTCTCCAAAAAGCCAGAAAACTATGGATCTGGTAAGCTGTAGTCCCATATCAAATGGACACTCTCTACCTTCTGGTTTTGACATTGGCAGCGATGATGGGATTAGCAGCTCAGGTTCATGGGCCAATGCTTTAATATCAGAACTGGAACAATTCCGACATGCAAAGCCCAAGAATCCTTCAGAATGCAAAACTATTGTATCAGATATGAGTTTAATGGATGATTTTGTTGAGATGGAGAAATTAGCAATAGTTTCTGCAGATACACATTTTCAAGGTTCTCATGTTCCTTCAAACACAAGAAATGCCTCTGCAAATACCCTGGAAAAGGAGTCTGGTGGGTTTCTCTCAGATTCAACAGGTAAGGAATTAGTTCCAGTAGCGCAAGATTACTCCAGCTCCACTGACACAAAATGGGAGACTCAATCAAAGGATGGATCCATTGGAAAATCTCGTGATTGGCTTCAGGATGTTTTGAAGGTGATGTTGGAGCAGAACTGTGTTTCAAAAAGAAGCCTTCATGAACTTCTCGATGACATTAAAATCGCTTTGGGTTTTGTGAATGATCCAAGTGTTGTTGAAGCTGATAAAGCAGCAAGCTCAAGGCATCTGGGAGAACCTGACTCTCAACCTATTAGTGGCTACATCACTTGGAAGTCCATGGAGTTTCCCATGGCGGGTTCACTTCACAAAGGTTCTGTTATTGACACCTCAGTGGAAGGAGCAAGCCATCAGCAGAATCAATCTGATCTGAGCAAGTCAATCTGCAAAATTATAGAGCTTATCAAATCATTCAATCTAACATCTCTAACCAATAGTAATGCTCCAAATGAAGGGTCAGAGGGGGACAAGAGTTCCTCACCGTGTAAGAACTCACCAACACCTGCAGATTACTTGGTTCATGTTTTTCGATGGAAGAGCTCTGAATTAAGTAGTGTTCTATTTCAACTCATTAACATTTGTAATGATCTTTTGAGTGAAAAAGCTTATCTTGAAAATTTTGTGGGGGAATTGGCATTTACTTTGCACTGGATTATGAGCAACTGCATTACCCTTCAAGATGGTTCAAGCATGAGAGATGAGATAAAGAGGCATTTTGGTTGGGGTGCATCACAAAGTGAAAGTGAACCTGAAGTTGGAGTCGAAGGCGATCATGAATCCAAAAGGCAGTCATATGGTTGGCCCTTGGGTGCTTATTCAAATGATCAAAATGTTTTTGAAATTGAGAAGATTCAGTCTAATCTGCAAGAAGAAAATAGGGGGCTGAAAGATGAGTTGAGGAAGATAGAATCTGCAAAGAAAGATTTGGAAGCAAAGCTACAGTCAGCAACTGATAACAGCCAGGCCTTGATGAATCAGCTTGAGAAATCAGAACAGAGCATTGGAAGCTTAAGGACAGAACTGGAAACCTTGAAAGACTCAAAGGGGTTGATTGAGGATCAAATTGAGAATCAGAAGTTGATTAATGAAGAGCTCAACACCCAGCTCACAGTTGCCAAAGCTAAAATAAACGAGGTTCTCCAGAAGTTTTCAGCGTTGGAAGTGGAATTTGAGGATAAAAGTAACTCCTGCCAAGAACTAGAAGCAACATGTCTTGAGCTTCAGCTTCAGCTAGAAAGTTTCCCGGAGAAGGAAGTTTCAGAGGCCGACCAAGATCAAGAAGGAAAGCAACTCCAAACTGGCTGGGAGATCACAGCAGCTTCAGTGAAGTTGGCAGAGTGCCAAGAAACCATCCTAAACCTAGGGAAGCAGTTAAAGGCTCTAGCTTCACCAAGGGATAGAGCAATTTTTGACAAAGTTTATTCTACAACCAGCACGGCTACAAATGACAAGAAGTTGAGCCATCGCTCCTCCCTTCGGGATCGAATGCTAGCTGATGATGATGCTGACACTGAGGTTTTCAAGTCCCCCAAGATAAAAGAAATTATAAGCACTGCCCATATACCATCCACACTTGGCTCCAATAATTCCAATTCCTTTGATGCTCCTGATATACATGTAGAAGCCCCAGATGCATATCATGATTCGAAGCACAGAGCAGTCACTCCTGCTGTCGGGTCACTTGCAATAGTGCCAAGCAAGAAAAAGGGAGGGGCAGGTTTCTTAAGGAAGCTATTGCAGAGGAGGAGGAAAGGAGTTAGTAAGAGGTCTCTTTCCTATGCCAAGGTGTAG 3315 0.4169 MQESEIMDHKTWLWRKKSSMKTIVASDKPEMYLEGHEEEMPLTETLGLEGSMKNLNEKLAAVVDESKTKDDLVTKYARMAEEAIAGREKAEAEALSLKQELDEALNLGVAAKERLSHLDAALKQCMQQLTSLKEEQEQRIRDAVMKTLREFEKTQKNLEDNLTETSKRLTDLTVENTHLSKALLAKEKLIEDLCKIKSQADTEFKALMARLDSTEKENAFLKYEFRMLEKELEIRNEEREFNRRSAEAIHKQHLESVKKIAKLEAECQRLRLLVRKRLPGPAAVAKMKSEVETLGRDQTEMRRKKLNPMTGGLIARDGLVEKSSEIPSKKMSFLIERLCEVEEENKTLKEILAKKNNELHSPRLLCARTPSRFGQPEAQLGESPKSQKTMDLVSCSPISNGHSLPSGFDIGSDDGISSSGSWANALISELEQFRHAKPKNPSECKTIVSDMSLMDDFVEMEKLAIVSADTHFQGSHVPSNTRNASANTLEKESGGFLSDSTGKELVPVAQDYSSSTDTKWETQSKDGSIGKSRDWLQDVLKVMLEQNCVSKRSLHELLDDIKIALGFVNDPSVVEADKAASSRHLGEPDSQPISGYITWKSMEFPMAGSLHKGSVIDTSVEGASHQQNQSDLSKSICKIIELIKSFNLTSLTNSNAPNEGSEGDKSSSPCKNSPTPADYLVHVFRWKSSELSSVLFQLINICNDLLSEKAYLENFVGELAFTLHWIMSNCITLQDGSSMRDEIKRHFGWGASQSESEPEVGVEGDHESKRQSYGWPLGAYSNDQNVFEIEKIQSNLQEENRGLKDELRKIESAKKDLEAKLQSATDNSQALMNQLEKSEQSIGSLRTELETLKDSKGLIEDQIENQKLINEELNTQLTVAKAKINEVLQKFSALEVEFEDKSNSCQELEATCLELQLQLESFPEKEVSEADQDQEGKQLQTGWEITAASVKLAECQETILNLGKQLKALASPRDRAIFDKVYSTTSTATNDKKLSHRSSLRDRMLADDDADTEVFKSPKIKEIISTAHIPSTLGSNNSNSFDAPDIHVEAPDAYHDSKHRAVTPAVGSLAIVPSKKKGGAGFLRKLLQRRRKGVSKRSLSYAKV* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0434 1104 Coils Coil 80 107 - -
Vvi3g0434 1104 Coils Coil 197 231 - -
Vvi3g0434 1104 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 7 1089 - -
Vvi3g0434 1104 Coils Coil 115 175 - -
Vvi3g0434 1104 Coils Coil 789 855 - -
Vvi3g0434 1104 Pfam Filament-like plant protein, long coiled-coil 69 976 IPR008587 -
Vvi3g0434 1104 Coils Coil 863 890 - -
Vvi3g0434 1104 MobiDBLite consensus disorder prediction 653 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0434 Vvi-Chr3 3656583 3664516 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0434 - - vvi:100245190 2104.72