Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0431 ATGGAGTCGATCACCTTCTCTGATCTCCACGTCATCGCTGGACCCTCCGTAACTCCCCACGGAGCCCGAGGAGGATCTCCCTCTCTTTCTAGAACCTTCTTCTCTCCCTCTCGATTTCGCTCCCCTGTTCCCCTTGTCGCTCTTCGCCGTCGCCCTGCTCACGCCGCCATCACTACTAACTCCGTTCCGCATAGAAATGGAACATATAGAGTTGGTGATTTTATGACAAAAAAGGAGCATTTACATGTTGTAAAACCTACAACCCCTGTTGATGAAGCATTAGAAGCTCTTGTGGAGAAAAAAATTACTGGCTTTCCTGTGATTGATGAAGATTGGAAATTGGTTGGTCTTGTTTCTGATTATGATTTGTTAGCACTTGACTCCATATCAGGTGGTGCTCAAATTGACACAACCCTGTTTCCTGATGTTGATAGTTCTTGGAAGGCGTTCAATCAGATACAGAAACTCCTTGCTAAAACTAAGGGGAAAGTTGTTGGTGATGTGATGACACCTGCTCCAGTTGTTGTTCATGAAACCACCAACCTTGAAGATGCTGCTAGGTTATTGCTCGAAACAAAGTACCGCCGGTTGCCTGTAGTAGATGGTGATGGCAAGCTGGTTGGAATTGTCACAAGGGGAAGTGTTGTTAGGGCTGCCCTCAAGATAAAAGGTACTAGAGAAAAGTTGCCATGA 693 0.4589 MESITFSDLHVIAGPSVTPHGARGGSPSLSRTFFSPSRFRSPVPLVALRRRPAHAAITTNSVPHRNGTYRVGDFMTKKEHLHVVKPTTPVDEALEALVEKKITGFPVIDEDWKLVGLVSDYDLLALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLAKTKGKVVGDVMTPAPVVVHETTNLEDAARLLLETKYRRLPVVDGDGKLVGIVTRGSVVRAALKIKGTREKLP* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0431 230 CDD CBS_pair_plant_CBSX 77 218 - -
Vvi3g0431 230 Gene3D - 66 225 IPR046342 -
Vvi3g0431 230 SMART cbs_1 172 220 IPR000644 -
Vvi3g0431 230 SMART cbs_1 80 128 IPR000644 -
Vvi3g0431 230 ProSiteProfiles CBS domain profile. 169 227 IPR000644 -
Vvi3g0431 230 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 50 225 - -
Vvi3g0431 230 ProSiteProfiles CBS domain profile. 75 137 IPR000644 -
Vvi3g0431 230 Pfam CBS domain 165 219 IPR000644 -
Vvi3g0431 230 Pfam CBS domain 71 125 IPR000644 -
Vvi3g0431 230 SUPERFAMILY CBS-domain pair 63 218 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0431 Vvi-Chr3 3594469 3603237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0431 - - vvi:100257224 435.261