Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0430 ATGGCGTCCGATGCCGGGAAAGTTGAGATGCTGTTTTTCCCATACGTCGGTGGCGGCCACCTCATCCCTATGGTCGACCTCGCCAGAGTATTCGCTTCTCGGGGAGCTAAATCCACCATCATCACTGCTCCAGATAATGCCCTGCTCATCCACAAAGCCATTCTTCGTGATCAGAAACTTGGCCACGACATCAACCTCCACACCCTCGAGTCACCTTCGGCTCCCGTCTCCTTCGGCGACATGTCCGCGCCGCCGTTCACCGACACCACGGTGCTCCGGGAGCCGCTCCGTCAACTGCTCATCCAACGGCCACCCGACTGTGTCGTCACTGACATGTTCCACCGTTGGGTAGCCGACGATGTCCACGAGTTGGGCATCCGGATCATCGTCTTCAACGGCAGCGGTTGCTTCCCTCGATGTGGAGAAGACAGCCTTCGACGCTATTCGCCCCATGAGAAGGTGGGTTCGGAATCGGAGGTCTTTGTTCTGCCGGGTCTTCCTGATAGGATCGAATTGACGAGGTCTCAGGTTCCACACTTTGATCGAACACCCAACAAGCGCCCGAAGATGATGAACTGGGAAGCCAAGACTTATGGGTCGGTTGTCAACAGCTTCTACGAGCTGGAGCCTGCTTATGTAGACTATTTCAGGAACCAAATGGGGAAGAAGGCGTGGCTCGTCGGACCGGTTTGTCTCTGCAACAAAAATATTGAAGATAAAGCTGGGAGAGGCCAAGAGGCCTCCATTGATGAGCAGGCCTGTTTGAACTGGCTCGATTCGAAACAGCCTAACTCCGTTCTGTATGTTAGTTTCGGGAGTTTGGCTCGTCTCCCCCCTCGACAACTTCTAGAGATCGCCTGCGCTCTTGAGGCGTCCGGCCGGCCCTTCATATGGGTGGTGGGGAAAGTTTTCCAAACCGTCGCAGGAGAAGAAGAAAATTGGCTTCCTTCGGGATATGAGGAGAGAATGGTGGAATCGAAGATGGGTTTAATAATAAGGGGATGGGCGCCCCAATTGCTGATTCTAGAACACGCCGCCATCGGAGGATTCGTGACTCACTGTGGGTGGAATTCCACGCTGGAGGCAGTGTGCGCCGGGGTTCCGATGATAACGTGGCCGCTGACGGCAGAGCAATTCTTGAATGAGAAGCTGGTGACGGATGTATTGAGGGTTGGGGTTAGGGTGGGGAGCATGGACTGGAGGTCGTGGAAAGATGAGCCAACGGAGGTGGTGGGAAGGGAGAAGATGCAGACGGCGGTGGAGAGGTTGATGGGCGGCGGAGAAGAGGCGGTGGAGATGAGAAGCCGAGGGAGAGAGGTGGCGGGGAAGGCAAAGAGGGCTGTTGAAGAGGGCGGGTCATCGTACACAGATGCCATCGCTGTGATTGAGGAGCTTAAGGCTTGCCGGAAAGATGGAAAATTTTGA 1425 0.5537 MASDAGKVEMLFFPYVGGGHLIPMVDLARVFASRGAKSTIITAPDNALLIHKAILRDQKLGHDINLHTLESPSAPVSFGDMSAPPFTDTTVLREPLRQLLIQRPPDCVVTDMFHRWVADDVHELGIRIIVFNGSGCFPRCGEDSLRRYSPHEKVGSESEVFVLPGLPDRIELTRSQVPHFDRTPNKRPKMMNWEAKTYGSVVNSFYELEPAYVDYFRNQMGKKAWLVGPVCLCNKNIEDKAGRGQEASIDEQACLNWLDSKQPNSVLYVSFGSLARLPPRQLLEIACALEASGRPFIWVVGKVFQTVAGEEENWLPSGYEERMVESKMGLIIRGWAPQLLILEHAAIGGFVTHCGWNSTLEAVCAGVPMITWPLTAEQFLNEKLVTDVLRVGVRVGSMDWRSWKDEPTEVVGREKMQTAVERLMGGGEEAVEMRSRGREVAGKAKRAVEEGGSSYTDAIAVIEELKACRKDGKF* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0430 474 Gene3D Glycogen Phosphorylase B; 13 456 - -
Vvi3g0430 474 PANTHER GLYCOSYLTRANSFERASE 9 457 - -
Vvi3g0430 474 FunFam Os01g0598000 protein 197 251 - -
Vvi3g0430 474 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 253 386 IPR002213 GO:0008194
Vvi3g0430 474 CDD GT1_Gtf-like 11 465 IPR002213 GO:0008194
Vvi3g0430 474 Gene3D Glycogen Phosphorylase B; 242 446 - -
Vvi3g0430 474 FunFam Glycosyltransferase 255 449 - -
Vvi3g0430 474 ProSitePatterns UDP-glycosyltransferases signature. 335 378 IPR035595 -
Vvi3g0430 474 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0430 Vvi-Chr3 3591619 3593043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0430 7 467 Glycosyltransferase AT2G15490 44.672 2.44e-140 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0430 K14595 - vvi:100248565 969.533