Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0429 ATGGGCAACGAAACTGATCAGCTTCACGTCCTCTTCTTTCCATTCATGGCTCTTGGCCACATGATTCCAACCATAGACATGGCAAAGCTCTTCTCCGCGCGGGGCGTCAGAGCTACCATTATCACCACCCCTCTTAATGCACCAGTCGTATCCAAAACCATGGAAAGAGGTCATTACCTGGGGGCTCAAATAGGACTCCGAGTCATCCAATTTCCATCTGTCCAGGCTGGCCTTCCACAAGGCCTCGAGAATCTTGATCAGGACGCTTCTCCGGAAATTCGTCTTAAATTCTTCCTGGCTATGTCTTTGTTTCAGCAACCCCTGGAGCAGCTTCTTCAAGAATACCGCCCGCATGGCCTTGTTGCCGACGCCTTCTTCCCTTGGGCGTTAGATGTTGCATCTAAATTCGGTATTCCAAGGCTGGCTTTTCAAGGAACTGGCTTCTTTGCCATGTGTGCTCTTCAAAGTTTGACGGCACACAAGCCTTACAAGGGTGTGGGGTCAGACACTGAGCCCTTCCTGCTACCTGACCTTCCGGATGAAATCAAACTGACGAGGCTGCAAATTTCGAATGATTTGACATTGGGGCTCGAGAATGACTTCACCAGGTTCTTCAAGGAAGCTCGAGAATCAGAGGAGAGAAGCTATGGAACCATTGTCAACACCTTCTATGAACTTGAGCCCGCTTATGCTGAGCATTGGAGGAAGGTTTTGGGAAGGAAGGCGTGGCACATAGGCCCGGTTTCACTATGCAATAGAGACGCCCAAGATAAAACTCAGCGGGGAAAGGCAGCCTCTATTGATGAGGATGAGTGCTTGAAGTGGCTCAATTCAAAGTATCCCGACTCAGTGATATACGTATGTTTTGGGAGTGTGTCGAAGTTCCCAGCCGCCCAGTTGCTAGAGATAGCCATGGGTCTGGAAGCATCTGGGCAACAATTCATCTGGGTTGTGAGGAAGAACAAGGATGAAGGAGATGAGGAAGAGTGGCTGCCCCAAGGGTATGAGAAGAGAATGGAAGGGAAGGGCCTGATCATAAGAGGGTGGGCACCCCAAACGCTCATTCTGGATCATGAAGCAGTGGGAGGATTTGTGACACACTGTGGCTGGAATTCAACGCTGGAAGGCGTGTCTGCAGGGGTGCCAATGGTGACATGGCCTGTGTTCGCCGACCAATTCTACAACGAAAAGCTCTTGACTGATGTTTTGAAGATAGGCATTGGTGTTGGCGCTCAGCGATGGGTCCCATTTGTGGGTGATTTTGTGAAACAGGATGCTATAGAGAAGGCAGTGAAGGCAGTCATGGCGGGAGAAAAGGCCGAGGAACTCAGAAGCCGGGCCAAGTCGCTTGGAGGAATGGCAAGGAGGGCTATTGAAAAAGGAGGATCATCATATACTGACATGGATGCTTTGATAGAGGAATTGAAGTTGTACCACGCTCAAATATAG 1449 0.499 MGNETDQLHVLFFPFMALGHMIPTIDMAKLFSARGVRATIITTPLNAPVVSKTMERGHYLGAQIGLRVIQFPSVQAGLPQGLENLDQDASPEIRLKFFLAMSLFQQPLEQLLQEYRPHGLVADAFFPWALDVASKFGIPRLAFQGTGFFAMCALQSLTAHKPYKGVGSDTEPFLLPDLPDEIKLTRLQISNDLTLGLENDFTRFFKEARESEERSYGTIVNTFYELEPAYAEHWRKVLGRKAWHIGPVSLCNRDAQDKTQRGKAASIDEDECLKWLNSKYPDSVIYVCFGSVSKFPAAQLLEIAMGLEASGQQFIWVVRKNKDEGDEEEWLPQGYEKRMEGKGLIIRGWAPQTLILDHEAVGGFVTHCGWNSTLEGVSAGVPMVTWPVFADQFYNEKLLTDVLKIGIGVGAQRWVPFVGDFVKQDAIEKAVKAVMAGEKAEELRSRAKSLGGMARRAIEKGGSSYTDMDALIEELKLYHAQI* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0429 482 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 108 401 IPR002213 GO:0008194
Vvi3g0429 482 CDD GT1_Gtf-like 8 457 IPR002213 GO:0008194
Vvi3g0429 482 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Vvi3g0429 482 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 475 - -
Vvi3g0429 482 FunFam Glycosyltransferase 6 273 - -
Vvi3g0429 482 FunFam Glycosyltransferase 274 459 - -
Vvi3g0429 482 Gene3D Glycogen Phosphorylase B; 274 459 - -
Vvi3g0429 482 Gene3D Glycogen Phosphorylase B; 2 273 - -
Vvi3g0429 482 PANTHER GLYCOSYLTRANSFERASE 7 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0429 Vvi-Chr3 3587099 3588547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0429 6 476 Glycosyltransferase AT2G15490 53.846 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0429 K23260 - vvi:100252102 972.23