Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0428 ATGACCGCCGCTGAGATGGCCTCCATCGCCGGCGTGCTCCGGCGCTGCTCATCGCCGTGCAACTTCCTGATATTCGGGCTGACCCACGAGACCCTGCTCTGGAAAGCTTTGAACAGCAACGGCCGCACCATCTTCCTTGATGAGAGCGAGTTCTACATCGCCAAGTTCGAAGAGAAACACCCAGATATAGAGGCGTACGATGTGCAGTACACAACCAAGGTCAGCGAAATGTCGGAACTGATTCGGTCGGCGAAGGAGCAGCTCCGGAACGAGTGCAGACCTGTGCAGAACCTCCTCTTCTCCGACTGCAAACTCGGCATCAACGACCTCCCGAATCATCTCTACCAAGTAGATTGGGATGTGATCCTCGTGGACGGCCCTCGTGGGTACTTTCCAGCGGCGCCGGGGAGGATGTCGGCAATATTTACTGCCGGAGTTCTAGCGAGAAGCAAGAAGGGCGGCTCTGCCAAGACCCATGTGTTTGTACACGACATGAATAGGGATGTGGAGAGGATTTGCAGCAATGAGTTTCTGTGTAAAGAGAACTTGGTCGAGACCACGGATTTGCTGGGGCATTTTGTAGTGGAAACCATGAAACCCAATAGCTTTCGCTTCTGTAGAAACCCCACAAAATCATCGTCACCATCATCTTCATCATCATAA 663 0.5309 MTAAEMASIAGVLRRCSSPCNFLIFGLTHETLLWKALNSNGRTIFLDESEFYIAKFEEKHPDIEAYDVQYTTKVSEMSELIRSAKEQLRNECRPVQNLLFSDCKLGINDLPNHLYQVDWDVILVDGPRGYFPAAPGRMSAIFTAGVLARSKKGGSAKTHVFVHDMNRDVERICSNEFLCKENLVETTDLLGHFVVETMKPNSFRFCRNPTKSSSPSSSSS* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0428 220 PANTHER OS11G0490100 PROTEIN 1 207 IPR006514 GO:0045492
Vvi3g0428 220 Pfam Polysaccharide biosynthesis 4 193 - -
Vvi3g0428 220 NCBIfam TIGR01627 domain 1 206 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0428 Vvi-Chr3 3575390 3576052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0428 - - vvi:100267469 434.491