Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0422 ATGGAAGTAGGATGTGGTCTCTTAAACAGGGAAGCAAGAAGATGGGGTTTTGGTGTCACCTTAACCCTCATGTTGTGTTTGTCTATGAGGGTTTACATCCATGGTGTTTCTGAAGACCAGTATGCATTTATGGGGGATCTCAAGAACATGATTCTGGGCATATCAGTCGGAGAAATTTCCCCACAACACCATGATGTTGATGCAAAGAAACATGCAAAGAATGTTGTTTCTCCTAACTTAACAACGTGCCATGAATCTGTTCCTCGGCCTGGTCTCTCCGTGTACTGCTGCCCTCCAAAACCCGAATCAGAAGAGCCCTTCATCGATTTCCAGTTCCCCGATCCCTCCTCGCCTTTACGTCTGCGCCGGGCGGCCCATCTCGTTGATGATGACTACATAGCTAAGTACAGAAACGCCGTATCAATAATGAAATCCCTTCCTTATGATGATCCAAGGAGCTTCCTTAGCCAAGCGAACCTCCATTGTATTTACTGCACCGGCGCCTATAAGCAGAAAAACTCAGATATTCCTCTTCATGTCCACAGATCATGGCTGTTCTTTCCCTGGCACAGAATGATGCTCTACTTCCATGAGCGAATCCTCGGGAGTCTGATCGGAGATGACAGTTTTGCTTTGCCGTTTTGGAACTGGGACAACCCTGATGGCATGGTGATCCCTGAAATGTACGTGACTGGTTCATTAGTTGATACTGATCGGGAAAATTCTCATCTTCCACCCCAAGTTGTGGACTTGAACTACAATTTACAGGAGAAAGGATTGGGACCTGAGGAGCAGATAAAGATCAACATGGCGCTGATGTATACCCAAATGGTATCAGGTGCGAAGACGACTGAACTCTTCATGGGTTGTCCTTATAAGGGAGGTGAGGGAGGCTTCTGTGAAGGACCCGGCACCATAGAGCTTGCACCTCATAATACATTACACGATTGGACCGGTACCGGTTTGAATCCTGGAAGGGAGGACATGGGCTCATTCTACTCTGCTGGAAGGGACCCCATCTTCTATGGACACCATGGGAATGTAGACCGTCTTTGGGAAGTTTGGAGGAGGCTCCAATGGGAGTACTACAATTCAGAGATCACTGACACTGAATGGCTAGATTCTTACTTTTTCTTCCATGATGAGAAAAGGCAGCTTGTGAGGATCAAATTCCAGGATGTTGTCAACATAACAAGGCTCAGGTATGCTTATGAGGAGGTCGAGCTGCCATGGCTCAACGCCCGTCCTCGGCCTTCAGTCCCTCCCAAGATTGCCCGTGACATACTAAAAATGAGAGACCTTGATCATGAGAACAACCAGGAACTTCCAAGCAGCCCCTTTTTATCAGCAGACTTTGGACCCCATGGTCGAACTCTGGACACCACCATAAGGGTAAAGGTCCATAGGCCAAAGAAGCATAGGAGCAAGAAACAGAAAGATTTCAAAGAAGAAGAGGTCATGGTTGTGTATGGAATTGAGGTCAAGGAGGACAGTTATGTTAAGTTTGATGTGTATGTGAATGCAGTTGATGAGACATTAATGGTTGGTCCAGAGTTCAGAGAGTTTGCAGGGACCTTTGTTAACATTCCTATTGGTGTTTGGCCAGTAATGAGGAGGAAGAGTAATCTTAAATTGGGGATCTCAGAATTATTACAAGACTTGGAGGCAGATGAAGATGAGAGCATCTGGGTAACCTTGATACCAAGAGCTGAAGACTGTATGAATGTAACCATTGATGGGATTAGGATTGAATACATTGAATAA 1764 0.4586 MEVGCGLLNREARRWGFGVTLTLMLCLSMRVYIHGVSEDQYAFMGDLKNMILGISVGEISPQHHDVDAKKHAKNVVSPNLTTCHESVPRPGLSVYCCPPKPESEEPFIDFQFPDPSSPLRLRRAAHLVDDDYIAKYRNAVSIMKSLPYDDPRSFLSQANLHCIYCTGAYKQKNSDIPLHVHRSWLFFPWHRMMLYFHERILGSLIGDDSFALPFWNWDNPDGMVIPEMYVTGSLVDTDRENSHLPPQVVDLNYNLQEKGLGPEEQIKINMALMYTQMVSGAKTTELFMGCPYKGGEGGFCEGPGTIELAPHNTLHDWTGTGLNPGREDMGSFYSAGRDPIFYGHHGNVDRLWEVWRRLQWEYYNSEITDTEWLDSYFFFHDEKRQLVRIKFQDVVNITRLRYAYEEVELPWLNARPRPSVPPKIARDILKMRDLDHENNQELPSSPFLSADFGPHGRTLDTTIRVKVHRPKKHRSKKQKDFKEEEVMVVYGIEVKEDSYVKFDVYVNAVDETLMVGPEFREFAGTFVNIPIGVWPVMRRKSNLKLGISELLQDLEADEDESIWVTLIPRAEDCMNVTIDGIRIEYIE* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0422 587 PRINTS Tyrosinase copper-binding domain signature 337 355 IPR002227 GO:0016491
Vvi3g0422 587 PRINTS Tyrosinase copper-binding domain signature 212 217 IPR002227 GO:0016491
Vvi3g0422 587 PRINTS Tyrosinase copper-binding domain signature 310 321 IPR002227 GO:0016491
Vvi3g0422 587 PRINTS Tyrosinase copper-binding domain signature 181 198 IPR002227 GO:0016491
Vvi3g0422 587 ProSitePatterns Tyrosinase and hemocyanins CuB-binding region signature. 338 349 IPR002227 GO:0016491
Vvi3g0422 587 Pfam Polyphenol oxidase middle domain 367 416 IPR022739 GO:0004097
Vvi3g0422 587 PANTHER TYROSINASE FAMILY MEMBER 65 569 - -
Vvi3g0422 587 Pfam Common central domain of tyrosinase 151 357 IPR002227 GO:0016491
Vvi3g0422 587 Gene3D - 74 416 IPR008922 -
Vvi3g0422 587 SUPERFAMILY Di-copper centre-containing domain 82 412 IPR008922 -
Vvi3g0422 587 ProSitePatterns Tyrosinase CuA-binding region signature. 181 198 IPR002227 GO:0016491
Vvi3g0422 587 Pfam Protein of unknown function (DUF_B2219) 457 585 IPR022740 GO:0004097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0422 K00422 - vvi:100257152 1222.61