Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0420 ATGGGAAAGAGCAGAGTACTGATAATCGGAGCAACCGGAAATCTAGGGCACCAACTCGCCAAAGCCAGCCTTCAATCTTCACATCCAACCTTCGCTCTCGTCAGAGACTCTGCTTTCTCTCATCCTCACAAGCGCCACGTCCTCCAAACCCTCTCCGACGCCGGAGCCACTCTTCTCAAGGGTTCGATTGAAGATGAATCGAGCCTCGTTGAAGCGATGAAGCAAGTGGATGTAGTGATTTGCGCTGTTTCCTCCAAGCAGGTTCTGGATCAGAAGCCTGTTATTAAAGCTATCAAACTAGCTGGTTGCATCAAGAAGTTCATTCCCTCAGAATTTGGACTCGATCCAGAAAAAACTCAAATGTCCGATTTGGACCATGGGTTTTATTCAAGGAAAGCTGAAATTCGGCATCTTATAGAAGCTGAAGGCATACCCTATACCTGCATCTCATGCAATTTCTTCATGAACTATTTACTTCCATCACTAGTTCAACTGGGTGCAAAGACCCCTCCCATGGATAAGGTCACCATTTTTGGGAATGGAAATGTTAAAGGTGTCTTTGTGAAGCAAAGTGACATTGCTGCCTTCACCATTAGTGCAGTGGATGATCCGCGAACTCTGAATAAGGTGGTGTATCTGAGGCCACCAGGAAATGTTTACTCCATGAATGAGCTGGTTGAGCTTTGGGAAAGTAAGATTGGAAAAAAGCTTGAGAAGGTTTATGTAACAGAAGAGGAGCTTCTTAAGAAAATTAAAGAGACTCCATTTCCAGACAACATGGATATGGTATTTATATATTCAGCTTTCGTGAAGGGAGACCAGACATATTTTGATATTGAGGCATCCGGCGGAGTTGACGGGACACAACTGTATCCACACCAGAAATATACTACAATCAGTGAATATTTAGACACCCTCCTGGAAGAAAAGTAA 933 0.4394 MGKSRVLIIGATGNLGHQLAKASLQSSHPTFALVRDSAFSHPHKRHVLQTLSDAGATLLKGSIEDESSLVEAMKQVDVVICAVSSKQVLDQKPVIKAIKLAGCIKKFIPSEFGLDPEKTQMSDLDHGFYSRKAEIRHLIEAEGIPYTCISCNFFMNYLLPSLVQLGAKTPPMDKVTIFGNGNVKGVFVKQSDIAAFTISAVDDPRTLNKVVYLRPPGNVYSMNELVELWESKIGKKLEKVYVTEEELLKKIKETPFPDNMDMVFIYSAFVKGDQTYFDIEASGGVDGTQLYPHQKYTTISEYLDTLLEEK* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0420 310 Gene3D - 5 293 - -
Vvi3g0420 310 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 277 IPR036291 -
Vvi3g0420 310 CDD PCBER_SDR_a 5 302 IPR045312 GO:0016491
Vvi3g0420 310 Gene3D - 153 303 - -
Vvi3g0420 310 Pfam NmrA-like family 6 237 IPR008030 -
Vvi3g0420 310 PANTHER PINORESINOL REDUCTASE-RELATED 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0420 Vvi-Chr3 3457811 3461238 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0420 - - vvi:100267485 611.298