Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0416 ATGTCCGAAAAGAGCAAGATTCTCATAATCGGCGGCACTGGCTACATCGGAAAATTCATCGTCGCTGCCAGCGCTAAGTCCGGTCACCCTACCTTCGCTCTCGTCAGAGAATCCGCCGTTTCGAATCCTTCCAAGTCGGAAATCATTGAGATTTTCAAGAGCTCCGGCGTGACTTTGGTGTATGGTGATCTATACGATCACGAGAGTTTGGTGAAGGCGATTAATCTAGTGGATGTGGTCATCTCGACCGTTGGTCGCGCACAGTTGTCGGATCAAGTCAAGATCATTGCTGCCATCAAAGAAGCTGGAAATGTCAAGAGATTCTTCCCATCAGAGTTTGGAAATGATGTGGACCGTGTACATGCGGTTGAGCCAGCAAAAACAGCCTTTGAGATAAAGGCTCAAATCCGCCGCACTATTGAGGCTGAAGGAATTCCCTACACCTATGTGTCCTCCAACACATTTGCTGGCTTTTTCCTTCCTACATTTTCACAGCCTGGAGCCACCGCTCCCCCCAGGGATAAAGTTATTATTTTAGGAGATGGGAATCCAAAAGCTGTTTTTAACAAGGAGGATGACATTGGCACCTATACCATTAAAGCTGCGGATGATCCTAGAACCTTGAACAAAATCCTTTACATCAGGCCTCCTCAGAACACCTACTCATTCAACGAAATTGTCTCCTTATGGGAAAAGAAGATTGGAAAAACCCTTGAGAAGATATATGTTCCAGAGGAGCAAGTTCTGAAGAACATCCAAGAAGCCTCTGTTCCACTCAATGTGATGTTAGCATTCTGTCACTCTGTTTTCGTTAAGGGAGACCACACCAACTTTGAGATCAAGCCATCATTTGGAGTGGAGGCTTCAGAGCTATATCCTGATGTCAAATACACAACTGTGGATGAGTACCTCAACCAGTTTGTGTGA 927 0.4563 MSEKSKILIIGGTGYIGKFIVAASAKSGHPTFALVRESAVSNPSKSEIIEIFKSSGVTLVYGDLYDHESLVKAINLVDVVISTVGRAQLSDQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHAVEPAKTAFEIKAQIRRTIEAEGIPYTYVSSNTFAGFFLPTFSQPGATAPPRDKVIILGDGNPKAVFNKEDDIGTYTIKAADDPRTLNKILYIRPPQNTYSFNEIVSLWEKKIGKTLEKIYVPEEQVLKNIQEASVPLNVMLAFCHSVFVKGDHTNFEIKPSFGVEASELYPDVKYTTVDEYLNQFV* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0416 308 Gene3D - 6 294 - -
Vvi3g0416 308 Gene3D - 154 304 - -
Vvi3g0416 308 PANTHER PINORESINOL REDUCTASE-RELATED 3 308 - -
Vvi3g0416 308 CDD PCBER_SDR_a 6 303 IPR045312 GO:0016491
Vvi3g0416 308 Pfam NmrA-like family 7 298 IPR008030 -
Vvi3g0416 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 276 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0416 Vvi-Chr3 3430195 3433729 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0416 K23050 - vvi:100255484 600.897