Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0415 ATGTCCGAAAAGAGCAAGATTCTCATCATCGGCGGCACTGGCTACATCGGAAAGTTTATCGTCGCTGCCAGCGCTAAGTCCGGTCACCCTACCTTCGCTCTCGTCAGAGAATCCACAGTTTCGGAGAAGTTTGAAATCATTGAGAGTTTCAAGAGCTCTGGCGTGACTTTGGTTTATGGAGATCTATACGATCACGAGAGTTTGGTGAAGGCGATCAAGCAAGTAGATGTTGTGATCTCCACGGTTGGCCACGCACAGTTGCCGGATCAAGTGAAGATCATTGCTGCCATCAAAGAAGCTGGAAATGTTAAGAGATTCTTCCCATCAGAGTTTGGAAATGATGTGGACCGTGTCCATGCTGTTGAGCCAGCAAAAACAGCATTTGCAACTAAGGCTCAAATCCGCCGCACTATTGAGGCTGAAGGAATTCCCTACACCTATGTATCCTCCAACTTCTTTGCTGGCTATTTCCTTCCTTCATTGTCACAGCCTGGAGCCACTACTCCCCCAAGAGATAAAGTTATTATTCTAGGAGATGGGAATCCAAAGGCTGTTTTTAACAAGGAGGATGACATTGGCACCTATACCATCAAAGCTGTGAATGATCCTAGAACTTTGAATAAAATCCTCTACATCAGGCCCCCTCAGAATACTTACTCATTCAATGATCTTGTCTCCTTGTGGGAGAAAAAGATTGGGAAAACCCTTGAAAAGATCTACGTACCAGAGGAGCAAGTGCTGAAGAACATCCAAGAAGCTTCTGTTCCACTCAATGTGATATTATCAATCAGTCACTCTGTTTTCATTAAGGGAGACCACACCAACTTTGAGATTCAGCCATCATTTGGAGTTGAGGCTACAGAGCTATATCCCGATGTCAAATACACAACTGTGGATGAGTACCTCAATCAGTTTGTCTGA 921 0.4463 MSEKSKILIIGGTGYIGKFIVAASAKSGHPTFALVRESTVSEKFEIIESFKSSGVTLVYGDLYDHESLVKAIKQVDVVISTVGHAQLPDQVKIIAAIKEAGNVKRFFPSEFGNDVDRVHAVEPAKTAFATKAQIRRTIEAEGIPYTYVSSNFFAGYFLPSLSQPGATTPPRDKVIILGDGNPKAVFNKEDDIGTYTIKAVNDPRTLNKILYIRPPQNTYSFNDLVSLWEKKIGKTLEKIYVPEEQVLKNIQEASVPLNVILSISHSVFIKGDHTNFEIQPSFGVEATELYPDVKYTTVDEYLNQFV* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0415 306 CDD PCBER_SDR_a 6 301 IPR045312 GO:0016491
Vvi3g0415 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 255 IPR036291 -
Vvi3g0415 306 Pfam NmrA-like family 7 296 IPR008030 -
Vvi3g0415 306 Gene3D - 152 302 - -
Vvi3g0415 306 PANTHER PINORESINOL REDUCTASE-RELATED 3 306 - -
Vvi3g0415 306 Gene3D - 6 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0415 Vvi-Chr3 3421853 3425512 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0415 K23050 - vvi:100260557 601.668