Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0414 ATGAATGCTCAAGTTAATTTTCTTGCAAGAAGAATCGGAGGAGTAAATAGAGATTGTGCATCATCCCCCAAGGTCGATTCGAATTTCAAATTTGGCACTAATTTTCCTTTTAAGAAAAATTTGTGTACAGGCGCAATGTCCGAAAAGAGCAAGATTCTCATCATCGGCGGCACCGGCAAAATCGGAAAATTCATTGTTCCTGCCAGCGCTAGGTCTGGTCATCCTACTTTCTCTCTCGTCAGAGAATGCGGCCTTTCGAATCCTGCGAAGTCGGAACTCTTTGAGAGTTACAAGAGCTCCGGCGTGACTCTGCTGTATGGAGATCTGTACGATCACGAGAGTTCGGTGAAGGCGATCAAGCAAGTGGATCTGGTGATCTCTTCGGTTGGCCACATGCTGTTGCCGTATCAAGATAGGATCATTGCTGCCATCAAAGAAGCTGGAAATGTCAAAGTAAAACTCACGCAATCTCTCCTCTTCTCCTTCTCATTTCCCTCTCTGCTATGCAAATCCAAGTACTATGATATATATCTATATATATATATATATATATAA 555 0.427 MNAQVNFLARRIGGVNRDCASSPKVDSNFKFGTNFPFKKNLCTGAMSEKSKILIIGGTGKIGKFIVPASARSGHPTFSLVRECGLSNPAKSELFESYKSSGVTLLYGDLYDHESSVKAIKQVDLVISSVGHMLLPYQDRIIAAIKEAGNVKVKLTQSLLFSFSFPSLLCKSKYYDIYLYIYIYI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0414 184 Gene3D - 51 151 - -
Vvi3g0414 184 Pfam NmrA-like family 52 151 IPR008030 -
Vvi3g0414 184 PANTHER PINORESINOL REDUCTASE-RELATED 48 151 - -
Vvi3g0414 184 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 152 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0414 Vvi-Chr3 3417114 3417959 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0414 K23050 - vvi:109122363 323.553