Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0412 ATGATTAAACTCACAAAAGCTGCAGATATTATCTCTTCATCTCACTCGCCTTTATTCATCCTCCATTCCTCTTCATTCATCAATCCCACCTTCTTCACCCTCCCCATGGCTGATGCCATCGTTTCTATTGTGCTGGAACGCTTAACTTCGGTTGTTGAACAGCAGATTCATGAACAAGTTTCTCTGGTTCCGGGTGTTGAATCAGAAATTCAAAGTCTCAAAAACACACTCCGCTCCGTCCGAGATGTTCTTGAAGATGCCGAGAGGAGAAAAGTGAAGGAAAACTCTGTCCAAGGTTGGTTGGAGAGGCTCAAAGACATGGCCTACGAAATGATGGACGTGCTGGATGAGTGGAGCATTGCTATTTTTCAATTCCAGATGGAGGGAGTTGAAAATGCTTCCACGTCTAAGACGAAGGCATTTGACATGTCTCAGGGCATTGGATTTGAGCAGCAATCGGTTGATTGA 468 0.4466 MIKLTKAADIISSSHSPLFILHSSSFINPTFFTLPMADAIVSIVLERLTSVVEQQIHEQVSLVPGVESEIQSLKNTLRSVRDVLEDAERRKVKENSVQGWLERLKDMAYEMMDVLDEWSIAIFQFQMEGVENASTSKTKAFDMSQGIGFEQQSVD* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0412 155 Coils Coil 70 90 - -
Vvi3g0412 155 CDD RX-CC_like 37 143 IPR038005 -
Vvi3g0412 155 Gene3D - 40 146 - -
Vvi3g0412 155 Pfam Rx N-terminal domain 40 131 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0412 Vvi-Chr3 3406269 3408097 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0412 - - vvi:104878761 268.085