Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0410 ATGGCCGACAAGATCCTCATCATCGGCGGCACCGGATACATAGGAAAATTCATTGTCGCCGCCAGCGCCAAGTCCGGTCACCCTACCTTCGCTCTCGTCAGAGACACCACCCTTTCAGATCCTACGAAGTCCCAAATCATCAAGAGTTTCAAGAGCTCCGGCGTCACTTTGGTCCATGGAGATCTAAACGATCACCAGAGTTTGGTAAAGGCGATCAAGGAAGTAGATGTGGTGATATCCACCGTTGGTGGCGGGCAGTTGCAGGATCAAGCGAAGATCATAGCTGCAATCAAAGAAGCTGGAAATGTCAAGAGATTCCTCCCATCAGAGTTTGGAAATGATGTGGACCGTCTCCATGCTGTTGAGCCAGCAAAATCAGTGTTTGCTATCAAAGTTCAAATCCGCCGAGCTATTGAGGCTGAAGGAATTCCCTATACCTATGTGACCTCCAACTTCTTTGCTGGCTATTTCCTTCCTACATTAGTACAACCTGGAGCCACTGCTCCCCCCAAAGATAAAGTTATTATTTTAGGTGATGGAAATCCAAAAGCTGTTTTTAACAAGGAGGATGACATTGGCACCTATACTATCAGGGCTGTGGATGATCCGAGAACCTTGAATAAAATCCTCTACATCAAGCCCCCTCAGAACATTTACTCATTCAACGATCTTGTCTCCTTGTGGGAGAAGAAGATTGGAAAAACCCTGGAGAGGATCCATGTTCCAAAGGAGCAAGTTCTGAAGAACATCCAAGAAGCCGAATTTCCAGTGAATGTGATTATGGCAATCAGTCACTCTGTTTTTATAGAGGGTGACCAGACCAACTTCGAAATTGAACCATCATTTGGAGTAGAAGCTTCAGAGCTATACCCTGACGTCAAATACACAACTGTGGATGAGTACCTCAATCAGTTTGCCTGA 921 0.4582 MADKILIIGGTGYIGKFIVAASAKSGHPTFALVRDTTLSDPTKSQIIKSFKSSGVTLVHGDLNDHQSLVKAIKEVDVVISTVGGGQLQDQAKIIAAIKEAGNVKRFLPSEFGNDVDRLHAVEPAKSVFAIKVQIRRAIEAEGIPYTYVTSNFFAGYFLPTLVQPGATAPPKDKVIILGDGNPKAVFNKEDDIGTYTIRAVDDPRTLNKILYIKPPQNIYSFNDLVSLWEKKIGKTLERIHVPKEQVLKNIQEAEFPVNVIMAISHSVFIEGDQTNFEIEPSFGVEASELYPDVKYTTVDEYLNQFA* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0410 306 PANTHER PINORESINOL REDUCTASE-RELATED 3 305 - -
Vvi3g0410 306 FunFam Bifunctional pinoresinol-lariciresinol reductase 1 4 169 - -
Vvi3g0410 306 Gene3D - 4 292 - -
Vvi3g0410 306 Gene3D - 152 302 - -
Vvi3g0410 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 274 IPR036291 -
Vvi3g0410 306 Pfam NmrA-like family 5 296 IPR008030 -
Vvi3g0410 306 CDD PCBER_SDR_a 4 301 IPR045312 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0410 Vvi-Chr3 3397311 3400753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0410 K23050 - vvi:100243450 604.364