Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0406 ATGGATTTGGGGCAAGTGGAGGAGGTGGTATTGCTGAGAAGAAAGATGCCCTCATCTCTAAACCCACCAACCAACTCGACTCTGGCACTGCCCTCCAAGTCTTTCTTGATCACATCCCAATCAGCTCCATTCCCGGCCTTCAAAATTCACTCTCTGGTACCTATTCTATTTGTGTGTGTGTATATTCGTGGAGTCCCTTTTCTGTTTGATTCATTTGACACCCTTGTTGAGATTTGGATTTCCTTTTCACAAGTTCTGGAACTGAAAACTGGGGATTCTGTGAGGGATGCCATTCATTTTCTGTACGAGAAGAATGTGCTTGGAGCTCCTATAGCAGATGTGTTGGAATCATCAGATGACTCAAATGCCATCTCCAGAAGGTTTTCTGATCAGTATGTGGGTTTCATTGATTTTGCCAGTATGGTTCTTTGGTCTCTTGAGGAAAGTGAAAAGGCTGAAGGGGATGGCAATTATAACATTGGCAACAATGGGATCTTCTCCATGCTAGATCAGAACCCCCACATCGGCCAAACTAAGATTGGTGTGCTAGCAAAGTCATTCCTGTGGGATCCCTTCTTCCCTATAACCCTAGATGACTCCCTAATGCATGTCCTTCTGCTTCTTTCCACTCACCGGCTTCAAATCTTGCCAGTGATGGAGCAGCCCAACTCTAAAGTCATTGGCTTTGTCACCCAGAATGCAGTGATCCAATTGCTTCTTCAATCCAGTGGACTGGAGTGGTTTGATAACCTTGCAGACAAGGCTCTATCCGAGTTTCGGTACAGCAACTCTTTATCATTTCGGTTTGCCAACCAAAGCATCGCTGAGGGTTTTCATGTCTTGTGGAAAAACCGAACTTGCCCCATTGCAGTTCTGAATAGAGAGAATAAAAGGCTCATCGGCAGTTTGAGGAGCAGCGACATCCATCTTCTTCTGGACAATGATGATCTCTTTCACGGTAGGAAGACTCGAACTATTGAAGAATTCATTCATTTGGATGCAAGAAAGTCACATGCCGATGCATCCATTGAAGGAGACCTGGGAGCTCTTGTTTCAGCAGGGATTCTCCGTCTGAGAAACAGCGTCCTTCCAAGAATGGACTGGCCGGTCACCAACAGGAAAACTGACACTCTCAAGCAGGCCATGAAAAACTTGGCAGAGACCAGGAGTAATTTCAGCTTTCTGGTTGATGAACTGCAGCACTTAACAGGAGTGCTCACAGTGAGAGACATGATCACCCAGTTTGCTCCACCTTGTGTAGATTCAAGGTTCACTGGAGGAGGTTTCTTTGAATCTGCTCTAGAACAGTCTGGCTGTCAGGTCAAAAATGGAACCTTAGTTTGTGATCATTGA 1353 0.4545 MDLGQVEEVVLLRRKMPSSLNPPTNSTLALPSKSFLITSQSAPFPAFKIHSLVPILFVCVYIRGVPFLFDSFDTLVEIWISFSQVLELKTGDSVRDAIHFLYEKNVLGAPIADVLESSDDSNAISRRFSDQYVGFIDFASMVLWSLEESEKAEGDGNYNIGNNGIFSMLDQNPHIGQTKIGVLAKSFLWDPFFPITLDDSLMHVLLLLSTHRLQILPVMEQPNSKVIGFVTQNAVIQLLLQSSGLEWFDNLADKALSEFRYSNSLSFRFANQSIAEGFHVLWKNRTCPIAVLNRENKRLIGSLRSSDIHLLLDNDDLFHGRKTRTIEEFIHLDARKSHADASIEGDLGALVSAGILRLRNSVLPRMDWPVTNRKTDTLKQAMKNLAETRSNFSFLVDELQHLTGVLTVRDMITQFAPPCVDSRFTGGGFFESALEQSGCQVKNGTLVCDH* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0406 450 SMART cbs_1 368 416 IPR000644 -
Vvi3g0406 450 SMART cbs_1 191 240 IPR000644 -
Vvi3g0406 450 Gene3D - 71 243 IPR046342 -
Vvi3g0406 450 Gene3D - 261 419 IPR046342 -
Vvi3g0406 450 ProSiteProfiles CBS domain profile. 188 245 IPR000644 -
Vvi3g0406 450 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 73 415 - -
Vvi3g0406 450 SUPERFAMILY CBS-domain pair 74 240 IPR046342 -
Vvi3g0406 450 SUPERFAMILY CBS-domain pair 271 416 IPR046342 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0406 - - vvi:100248741 656.751