Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0401 ATGCATTTTGTTCATTCTTCTTATAGTCTCCATTGGCTTTCTCGGGTTCCCAAAGAACTGGAAACGGGTCAAGTATTGAACAAGTGGAATATATGCATAGCAAAGACAAGCCCTCCTGGAGTGTTCAAAGCATATTTTGAGCAATTTGAAAGAGACTTCACGTTGTTCTTGAGGTGGCGTTCAGAAGAGATAGTCCCTAGTGGTGGCATGGTCCTAACAGTCATGGGGAGTGTGAGGAGTGATGACCCTTGTTTCCATTGGGAGTTACTTGGAAGGGCGCTCAATGACATGGTGTTACAGGGGTTGGTCCTAGAGGCAAAGCTGGACTCATTCAATCTGCCATATTATGGGCCTACTGCAGAGGAAGTGAGGAGGTTGATTGAGGCACAAGGATCTTTTACTCTCAACAGACTTGAAGTTTTCAATATGAAGTGGGATCCCAACATGAACAGGGACAAGGGGTTTGACGAGCAAGAAAGTGGAAAACTTGTCTCAGATATGCTGAGAGCGGTGGGAGAGCCCATGCTGAAACATCACTTTGGACTAGAAATTATGGATGATCTGTTCAGTAGGGTTACTGAGAAGATAATTGACTGTATAGTGACAGAAAAATGGCAGTCCACTAATCTAATCATTTCCTTGACAAGGAAGGGTGCTTGA 660 0.4424 MHFVHSSYSLHWLSRVPKELETGQVLNKWNICIAKTSPPGVFKAYFEQFERDFTLFLRWRSEEIVPSGGMVLTVMGSVRSDDPCFHWELLGRALNDMVLQGLVLEAKLDSFNLPYYGPTAEEVRRLIEAQGSFTLNRLEVFNMKWDPNMNRDKGFDEQESGKLVSDMLRAVGEPMLKHHFGLEIMDDLFSRVTEKIIDCIVTEKWQSTNLIISLTRKGA* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0401 219 Gene3D Vaccinia Virus protein VP39 1 144 IPR029063 -
Vvi3g0401 219 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 199 IPR005299 GO:0008168
Vvi3g0401 219 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 217 IPR029063 -
Vvi3g0401 219 Pfam SAM dependent carboxyl methyltransferase 1 216 IPR005299 GO:0008168
Vvi3g0401 219 Gene3D - 15 196 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0401 Vvi-Chr3 3324329 3325170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0401 - K21483 qsu:111986461 256.144