Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0400 ATGGTCCTAACAATCTTGGGGAGTATCCAGAGCCATAACCCTTGCTGCATTTGGGAGTTGGTTGGCATCACACTTAATGACATGGTCTTACAGGTTCCCAAAGAACTGGGAACGGGTCAAGTAATGAACGAGGGAAATATATGCATAGCAAAGACAAGCCCTCCCGGTGTCTTCAAAGCATACTATGAGCAATTTGAAAGAGACCTAACATTGTTTCTAGAGTCCCGTGCAGAAGAAATTGCCGCTGGAGGTGGCATGCTCCTAACAGTCATGGGGAGTATCCAGAGCAATGACCCTTGCAGCATTTGGGAGTTGGTTGGCATCACACTTAATGACATGGTCTTACAGGGGTTGATCCAAGAGGCGAAATTGGACTCTTCCAATCTGCCATACTATGCACCTACTGCAGAGGAAGTAAGAAAAGTGATGAGAGGCAGAAGGATCATTTACTCTCAAGAGACTCGAAAGTCATTGGAGAAGAGATCAGTGATGATCTTTTTGCTAGATTTGCCAAGAAGGTCATTGATTGCATGGCAAGAGAGAAACGCCAGTACCTAA 558 0.4534 MVLTILGSIQSHNPCCIWELVGITLNDMVLQVPKELGTGQVMNEGNICIAKTSPPGVFKAYYEQFERDLTLFLESRAEEIAAGGGMLLTVMGSIQSNDPCSIWELVGITLNDMVLQGLIQEAKLDSSNLPYYAPTAEEVRKVMRGRRIIYSQETRKSLEKRSVMIFLLDLPRRSLIAWQERNAST* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0400 185 Gene3D Vaccinia Virus protein VP39 61 145 IPR029063 -
Vvi3g0400 185 Gene3D - 31 128 IPR042086 -
Vvi3g0400 185 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 31 144 IPR005299 GO:0008168
Vvi3g0400 185 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 31 144 IPR029063 -
Vvi3g0400 185 Pfam SAM dependent carboxyl methyltransferase 31 144 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0400 Vvi-Chr3 3308724 3311907 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0400 K21483 - qsu:112005084 164.851