Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0385 ATGCTATCGCAAACCTCAGCATTCGTCTCATATTCTTCTGAGTTTCGAAGTGTTCGATTCTCTGCCAATCTCTCGACCTCTGCCGTTGGCCGAACCTCACTCAGTCTTCCAATGGCTTCTAATTCGAAGCTCTCAAATCAAATCCAGAACATCAGCTTAGGGCTCAATGACTCTGAACTCGACAGGTTCGCCGATGTCGGCAACAAAGTTGCTGATGCCGCCGGAGAAGTGATTCGCGGGTATTTTCGCAAAAAGTTTGACATTCTCCAGAAGGAGGATTTAAGTCCTGTAACAATTGCAGATCAAGCAGCAGAGGAATCTATGGTTTCAATCTTATTAGAGAGTTTTCCTTCTCATGCAATTTATGGAGAGGAGAATGGGTGGAGATGTAAAGAGAAGTTTGCAGACTATGTTTGGGTTTTAGATCCAATAGATGGGACAAAGAGTTTCATAACTGGCAAACCATTGTTTGGCACTTTAATTGCTCTTCTGCACAAGGGTAGACCGATTCTTGGCATAATTGATCAGCCTGTTTTACGTGAAAGATGGATTGGGATGAGTGGAAGAAAAACTACATTGAATGGACAAGAAGTAGCCACACGGGATTGTGCAAAACTAGCACAAGCGTATTTGTACACCACAAGTCCTCACCTGTTCAGTGGAGATGCTGAAGATGCATTTGCCCGTGTTAGAAATAAGGTGAAAGTGCCATTATATGGCTGTGACTGTTATGCTTATGCCCTTTTGGCATCTGGATATGTGGATCTTGTGATTGAGTCTGGTCTCAAGCCATATGATTTCCTTTCGCTGGTACCCGTGATAGAAGGTGCTGGGGGAGTCATAACTGACTGGAAAGGGCAACAGCTTTATTGGGAGGCTTCCTCAGATTCACATGCCCCAAGTTTTAATGTAGTGGCCGCAGGAGATGAAGAGCTTCACCAGCAAGCTCTAGATTCATTGCAATGGCAGTAA 972 0.4434 MLSQTSAFVSYSSEFRSVRFSANLSTSAVGRTSLSLPMASNSKLSNQIQNISLGLNDSELDRFADVGNKVADAAGEVIRGYFRKKFDILQKEDLSPVTIADQAAEESMVSILLESFPSHAIYGEENGWRCKEKFADYVWVLDPIDGTKSFITGKPLFGTLIALLHKGRPILGIIDQPVLRERWIGMSGRKTTLNGQEVATRDCAKLAQAYLYTTSPHLFSGDAEDAFARVRNKVKVPLYGCDCYAYALLASGYVDLVIESGLKPYDFLSLVPVIEGAGGVITDWKGQQLYWEASSDSHAPSFNVVAAGDEELHQQALDSLQWQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0385 323 ProSitePatterns Inositol monophosphatase family signature 1. 139 152 IPR020583 -
Vvi3g0385 323 NCBIfam histidinol-phosphatase 65 321 IPR011809 GO:0004401
Vvi3g0385 323 FunFam Inositol monophosphatase 50 198 - -
Vvi3g0385 323 CDD Bacterial_IMPase_like_1 63 317 - -
Vvi3g0385 323 Gene3D - 199 322 - -
Vvi3g0385 323 FunFam Inositol monophosphatase 199 322 - -
Vvi3g0385 323 Pfam Inositol monophosphatase family 63 301 IPR000760 -
Vvi3g0385 323 SUPERFAMILY Carbohydrate phosphatase 60 321 - -
Vvi3g0385 323 PANTHER PHOSPHATASE 46 320 - -
Vvi3g0385 323 Gene3D - 50 198 - -
Vvi3g0385 323 PRINTS Inositol monophosphatase superfamily signature 95 115 IPR000760 -
Vvi3g0385 323 PRINTS Inositol monophosphatase superfamily signature 188 211 IPR000760 -
Vvi3g0385 323 PRINTS Inositol monophosphatase superfamily signature 262 286 IPR000760 -
Vvi3g0385 323 PRINTS Inositol monophosphatase superfamily signature 139 155 IPR000760 -
Vvi3g0385 323 PRINTS Inositol monophosphatase superfamily signature 117 133 IPR000760 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0385 Vvi-Chr3 3176558 3180995 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0385 K18649 - vvi:100260677 645.195