Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0378 ATGCCTCGAAAACCAACACGGTGCCGCCCATCACCTAGACCTTTGCCTTTCACCTTTTCCCCATTTTTTCGTACAGTTGCTCAAGTTGCCTCTTATTGCAAGGCTAATCATCAAATCCATGAATCCAAGTTCCACAAGAAATCACCCCCTAATGCTGCAGGCAATGGAATTATTAATCACACTTTGGAAGAGAAGAGTGAGCAGTCTGAATATTCAGATGAAGACTGTTCTGAAGTGGTTGCCCAAGCCAATTTTGCCTTCTTTGATCCAAAACCGGATGACTTTCATGGGGTGAAAATCTTGCTGCAGACGTACCTTGACAATAAGCTATGGGATTTGAGTGGGTTTGTAGACTTAATATTGGGACAGACAACAGTTGGAACTGTTGTTAAAATAGAGGGTGATGAAGATGATGGAGTCTTCTCTCTTATTACCGCACTTAACTTGGGGAGATACAAGGGTCATAAATGTGTTATGGAGCTCAAGGAGTTTCTGCTAGATGTGGGCCAGGAGAAGGATGTAAAGGATGCATTGAGATTACTCTTGGGAGAAGAGGCACAAAATGTGGGTCTCTTAGTCTCTCAACGTGTGGTAAATCTTCCTCCCCAGCTTTTGCCACCTCTTTATGATGCCCTCTTTGATGAAATCTCATGGGCTACAGAAGATGAGCCTACAGAGGAGCTCAGGAGTTCCTTTTGCTTTAAGTTTTTTCTACTGATTAGTAGAATCTACAAGCATAAGAATGCAGGCCAAAGAAAAGGGACAAGAGTTGACATTGATGAAGCAATAATATATATTAAGCCCGAAGATGAAATCTTTCACAAGCTCAGCTCATGGTCCTTCAGTTTTCCTTTGCACACGCAACATGTTACAACTCATGAGCTAAGAAATTACCGGTTAATGGGGTTGGTCATGGCAATTGAAGCGGACAAAGTTTCTACATTCCGGAAGGAGTTGCACACTTTGATAGATGAACCCTGA 981 0.4251 MPRKPTRCRPSPRPLPFTFSPFFRTVAQVASYCKANHQIHESKFHKKSPPNAAGNGIINHTLEEKSEQSEYSDEDCSEVVAQANFAFFDPKPDDFHGVKILLQTYLDNKLWDLSGFVDLILGQTTVGTVVKIEGDEDDGVFSLITALNLGRYKGHKCVMELKEFLLDVGQEKDVKDALRLLLGEEAQNVGLLVSQRVVNLPPQLLPPLYDALFDEISWATEDEPTEELRSSFCFKFFLLISRIYKHKNAGQRKGTRVDIDEAIIYIKPEDEIFHKLSSWSFSFPLHTQHVTTHELRNYRLMGLVMAIEADKVSTFRKELHTLIDEP* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0378 326 PIRSF BCP1 34 326 IPR025602 -
Vvi3g0378 326 Pfam BCCIP 82 273 IPR025602 -
Vvi3g0378 326 PANTHER BRCA2 AND CDKN1A INTERACTING PROTEIN 3 324 IPR025602 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0378 Vvi-Chr3 3107636 3112730 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0378 K15262 - vvi:100248632 661.759