Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0373 ATGGATCAAAAGATGAAGGTCTATGTGACTGGGGCATCTGGGTTTCTGGCTTCTTGGCTGGTTAAGAGGCATCTCTTGTCCGGGAAATGGCAAGAAGCAGGCACATCTGTGGGGCTGGAGGGAGCAAGGGAGAGGCTCACATTGGCAAGGGCTGATTTAATGGAGGAGGGCGGTTTTGACAGGGCAATCATGGGATGCCATGGTGTCTTCCATACTGCTTCACCTGCAGAGATCCTGGTACCTGCTGTTGAAGGAACACTAAATGTGCTTCGTTCATGTAAGAAGAACCCGTCTCTAAGGCGTGTAGTACTCACCTCATCCACTTCAGCTGTGAGGGCAAGAGATGATTTTGACCCAAAAATACCTCTGCAGGATGAGTCATCCTGGAGCTCTGTGGAATTTTGTGAGCGCCTCCAGGGGAGACTGAGAAATGCAGATGGTTTGGAAGGATGGAATATGTTCACATCGATGATGTTGCACTCTGCCACATCGATCCTTGTTTATGAGCACGAAGACGCCCATGGACGATACCTTTGTAGCTCTGCAGAGCTGGACGACAATGAGTTAACCTCCTTGCTGTCGGCTCGCTATCCATCCTTACCTATACCAAAGAGGTCTGATGCCTTGGACATACCATACGTTGAGTTCAACACTTCAAAGTTGAAGAGCTTGGGGTTCAAGTTCAAGTCCATCCAGGATATGTTTGATGACTGCATTGCCTCTTTGGTGGAGGAAGGCCATTTGGGTCAAGTCTAA 756 0.4894 MDQKMKVYVTGASGFLASWLVKRHLLSGKWQEAGTSVGLEGARERLTLARADLMEEGGFDRAIMGCHGVFHTASPAEILVPAVEGTLNVLRSCKKNPSLRRVVLTSSTSAVRARDDFDPKIPLQDESSWSSVEFCERLQGRLRNADGLEGWNMFTSMMLHSATSILVYEHEDAHGRYLCSSAELDDNELTSLLSARYPSLPIPKRSDALDIPYVEFNTSKLKSLGFKFKSIQDMFDDCIASLVEEGHLGQV* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0373 251 Gene3D - 162 251 - -
Vvi3g0373 251 Gene3D - 2 161 - -
Vvi3g0373 251 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 247 IPR036291 -
Vvi3g0373 251 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 164 239 - -
Vvi3g0373 251 Pfam NAD dependent epimerase/dehydratase family 7 114 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0373 Vvi-Chr3 3056289 3059258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0373 7 246 Miscellaneous Gene Families AT5G19440 33.651 4.60e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0373 - - qsu:112003056 290.041