Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0372 ATGGATCAAAAGATGGTCGTCTGTGTAACGGGGGCATCTGGGTTTCTGGCTTCTTGGCTGGTTAAGAGGCTTCTCTTGTCTGGGTATCATGTCACTGGAACAGTTAGAGATCCAGGAAATGACAAGAAGCTGGCACATCTGTGGAGGCTGGAGGGAGCAAGGGAGAGGCTCACATTGGTGAGGGCTGATTTAATGGAGGAGGGCAGTTTTGACAAGGCAATTATGGGGTGCCATGGTGTCTTCCACACTGCTTCACCAGTAATGGGATCTGCTGCTGATCCAAAGGCAGAGATCCTGGTACCTGCTGTTGAAGGCACATTAAATGTTCTTCGTTCATGTAAGAAGAACCCATCTCTAAGGCGTGTAGTACTGACTTCATCCTCTTCCGCTGCGAGGGTAAGAGATGATTTTGACCCGAAAATACCTTTGGACGAGTCCTCCTGGAGCTCTGTGGAACTTTGTGAGAGCCTCCAGATATGGTATGCTCTATCAAAAGTCCTAGCTGAGAAGGCAGCATGGGAATTCTGCAAGGAGAACGGAATCGATTTGGTGACTGTTCTTCCCTCATTTGTCATTGGACCTAGCCTGCCACCTGATTTGTGTTCTACTGCATCTGATGTTCTTGGCTTGCTTAAAGGGGAGACTGAGAAATTCAAATGGAATGGAAGGATGGGATATGTTCACATTGATGATGTTGCACTCTGCCACATCCTTGTTTATGAGCATGAAAATGCCCATGGACGATACCTTTGTAACTCAGCTGTGGTAGACAATAATGTGTTAGCCTCCTTGCTGTCGGCTCGCTATCCATCCTTGCCTGTCCCAAAGAGGTTTGATGCCTTGGACAGACCATACTATGAGTTCAACACTTCAAAGTTGCAGAGCTTGGGGTTCAAGTTCAAGTCCATCCAGGAGATGTTTGATGACTGCGTTGCCTCTTTGGTGGAGAAAGGCCATCTGGGTCAAGTCTAA 972 0.4753 MDQKMVVCVTGASGFLASWLVKRLLLSGYHVTGTVRDPGNDKKLAHLWRLEGARERLTLVRADLMEEGSFDKAIMGCHGVFHTASPVMGSAADPKAEILVPAVEGTLNVLRSCKKNPSLRRVVLTSSSSAARVRDDFDPKIPLDESSWSSVELCESLQIWYALSKVLAEKAAWEFCKENGIDLVTVLPSFVIGPSLPPDLCSTASDVLGLLKGETEKFKWNGRMGYVHIDDVALCHILVYEHENAHGRYLCNSAVVDNNVLASLLSARYPSLPVPKRFDALDRPYYEFNTSKLQSLGFKFKSIQEMFDDCVASLVEKGHLGQV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0372 323 Gene3D - 2 323 - -
Vvi3g0372 323 Pfam NAD dependent epimerase/dehydratase family 7 244 IPR001509 -
Vvi3g0372 323 FunFam Dihydroflavonol reductase 4 322 - -
Vvi3g0372 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 314 IPR036291 -
Vvi3g0372 323 CDD FR_SDR_e 7 298 - -
Vvi3g0372 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0372 Vvi-Chr3 3050295 3052628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0372 6 318 Miscellaneous Gene Families AT5G19440 48.742 9.61e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0372 - - vvi:100246964 646.351