Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0366 ATGAGGATAGAGGTTTCTCACCCAATCCACCCCCAACACAAGCTAAAGCCTGAATACACAGAGATCCCTTTCAACTGTGATGGATGCAAAGAAGCAGGTATTGGCCTCAAACACAGATGCCAGCAATGTGAGTTTGACTTACACAAGTCATGTGCAGTGGCTCCTCCCACCATTACTCATCCCTTCTACAAGAAATGTGAGTTCCAATTCTTACACCAACCCCCCGGGGCAGCTTTGAGAATATGTGATGCATGTGGGAAGGATGTTCTAGGGTTTGTTTACCACTGCAAGAGATGTGGCTTTGATCTGCATCCTTGCTGTGCAAATCTTCCACAAGTCCTAAATGATGGGGAAAGAAACCTTTATCTGTGTCTCAAGCTTTCAAATTCATGCTACTGCTGTGGGGGCAAAGGGCCAGGTTGGTCTTATAGGTCCAAGTGCAAGACCTATAATCTTCATGTATCATGTGTGAAGAAGCTGCTTCTGGAGAATTGGCAGGCCATGCATCTGAAAGTGGACAGTAACAAAGTTAGGGAGTTGCAGACTAGGATCCCCAGCCTTGGAGGAACATTGAAAGATCATCATGGAGGTGGAAGGGGAGGAGGGAAGGCAAGCAAGTGTTCTCAGATAGCCACTGGTGCCATTAGTGCTGTTGTCTCTGCCATCCTGGGAGATCCCACTGCTATAATAGCTGCAGCTGTTGGGGCTTTGCTATTCAAGTAG 723 0.4716 MRIEVSHPIHPQHKLKPEYTEIPFNCDGCKEAGIGLKHRCQQCEFDLHKSCAVAPPTITHPFYKKCEFQFLHQPPGAALRICDACGKDVLGFVYHCKRCGFDLHPCCANLPQVLNDGERNLYLCLKLSNSCYCCGGKGPGWSYRSKCKTYNLHVSCVKKLLLENWQAMHLKVDSNKVRELQTRIPSLGGTLKDHHGGGRGGGKASKCSQIATGAISAVVSAILGDPTAIIAAAVGALLFK* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0366 240 Gene3D - 11 58 - -
Vvi3g0366 240 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 12 66 IPR002219 -
Vvi3g0366 240 Pfam C1 domain 8 52 IPR004146 -
Vvi3g0366 240 Pfam C1 domain 73 108 IPR004146 -
Vvi3g0366 240 Gene3D - 78 110 - -
Vvi3g0366 240 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 4 237 - -
Vvi3g0366 240 SUPERFAMILY Cysteine-rich domain 29 114 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0366 Vvi-Chr3 3023397 3024119 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0366 - - vvi:100257225 491.5