Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0359 ATGCTCCAAACATATTTGAAAGATATTTGCAGGACTGTCAATGGCCTTCTGAAAACGGCACTAGGTCCACCTCCTGGTTCTACTACAACCTTGTCTCCCATCCAAGATTTGACATTTCGGCTTGAATCAGTGAAGTGCTTGGTTAGCATTATTAAGTCAATGGGAGCTTGGATGGATCAACAGCTAATAATAGGAGATTTCTCTCCACCGAAGAGCTCTGAGAGTGAGATTTCAACAGAGAATCATGCAATCATCAATGGAGAAGAAGGAACTATCCCTGACTATGAGCTGCATCCAGAAACAAATTCAGGATTATCAGATGCTGCTGCCTTTGAGCAACGTCGAGCTTATAAACTAGAATTCCAGAAAGGCATCTCACTGTTCAATAGGAAACCTTCCAAGGGCATAGAATTTCTAATAAGCTCCAAGAAAATCGGTGGTTCTCCAGAAGAGGTGGCTGCTTTTCTTAAAAATACTGCTGGCCTAAACGAAACTGTGATCGGTGACTATTTGGGTGAAAGAGAGGATTTTTCTTTAAAAGTTATGCATGCTTATGTAGATTCATTTAATTTTGAAGCATTAGATTTTGGTGAAGCAATTAGGTTTTTCCTACGGGGCTTCAGGTTACCTGGAGAGGCACAGAAGATTGATCGCATCATGGAAAAGTTTGCTGAGCGGTATTGTAAATGCAATCCAAATTCATTTACCAGTGCTGATACTGCTTATGTTCTTGCTTACTCTGTGATATTGCTGAACACGGATGCCCACAATAACATGGTGAAAGATAAGATGACCAAGGCTGATTTCATCCGGAATAACCGAGGGATTGATGATGGCAAGGACCTACCTGAAGAGTATCTGGGTGCTATTTATGATCACATTGTAAAAAATGAAATAAAAATGAATGCCGATTCTTCTGCGCCACAGAGCAAGCAGGCAAACGGCTTCAATAAACTACTGGGCTTGGATGGTATATTCAATCTAGTCAATTGGAAGCAGACAGAAGAAAAACCATTGGGTGCGAATGGTCTTCTCATAAAGCACATCCAGGAGCAGTTTAAGGCAAAGTCAGGAAAATCAGAGTCTGTTTATTATGCGGTTACAGATGTAGCTATATTGAGGTTTATGGTGGAGGTCTGCTGGGGTCCTATGCTCGCTGCCTTCAGTGTAACTCTGGATCAAAGTGATGACAAGGTTGCTACTTCTCAATGCTTACAGGGCATCCGACATGCTGTGCATGTTACTGCAGTTATGGGCATGCAGACTCAGAGAGATGCTTTTGTTACAACTGTGGCCAAGTTTACTTTCCTCCACTGTGTTGCAGACATGAAACAAAAAAATGTTGATGCTGTGAAGGCAATAATAGCAATTGCCATTGAAGATGGTAATTTTCTTCAGGAAGCCTGGGAGCACATATTAACATGCCTCTCCCGTTTTGAGCATCTGCAATTGTTGGGAGAGGGCGCACCCCCTGATGCATCCTTTTTCACTACTTCCAACATTGAAACAGATGAAAAAACACACAAGTCTGCTGGTTTTCCATCTCTAAAGAGAAGGGGAACTCTTCAGAATCCAGCTGTGGTGGCTGTTGTTAGAGGGGGATCATATGATAGCACTACACTGGGAGTCAATACGTCAAACTTGGTAACTCCAGAGCAGATGAATAACTTCATTTTAAACTTGCATCTGCTGGATCAGATTGGAAGCTTTGAGTTGAACCACATATTTGCCCATAGCCAAAGGTTGAATAGTGAGGCAATAGTAGCTTTTGTGAAGGCTCTTTGCAAAGTTTCCATGTCAGAGTTGCAGTCTCCTACGGATCCTCGTGTATTCAGCCTCACAAAAATTGTTGAGATTGCGCATTACAATATGAACCGCATCAGACTTGTATGGTCTCGCATATGGAATGTTCTATCTGATTTCTTTGTATCAGTTGGCTTGTCAGAAAACCTCTCAGTTGCAATATTTGTGATGGATTCTTTGCGGCAACTTGCTATGAAATTTTTAGAGCGTGAAGAGCTGGCAAATTACAACTTTCAAAATGAATTTCTGAGACCTTTTGTGATTGTCATGCAGAAAAGCAACTCTACAGAAATTAAGGAATTAATAGTTCGGTGCATTTCACAGATGGTCCTTAGCCGTGTGAATAATGTGAAATCTGGCTGGAAAAGTGTTTTTATGGTTTTTACGGCTGCAGCTGCTGATGAAAGGAAGAATATAGTCTTGCTAGCCTTTGAGACCATGGAAAAAATAGTGCGAGAATATTTCCCTTACATAACTGAGACAGAGACGACAACTTTTACGGATTGTGTTAGATGCCTCATCACCTTCACAAATAGCAGATTTAACAGTGATGTAAGCCTCAATGCTATTGCATTTCTCCGGTTCTGTGCTGTCAAACTTGCAGAAGGGGGACTTGTTTGCAATGAGAGGAGTGAGGAAGGAGATTCGTCCACTCCACCAGTAGATAAGGATGCATCAGATGGACAATTGTTCACAGATAGAGATGATCATGCATCCTATTGGATTCCATTGCTCACAGGATTGTCAAAGCTAACATCTGATCCCAGATCAGCTATCAGAAAAAGTTCTTTGGAAGTGCTTTTTAACATCCTAAAGGATCATGGTCATCTTTTTTCACGTACATTCTGGGCTGGTGTTTTCAGTTTGGTTGTTTTTCCCATATTTAATTTTGTTAGTGACAAGGGAGGAACAGATGCAAACAATGACCAAGTTTTGCAAGCTTCAAGGCCTCCGCACCCTGATGTAGGCACATGGGATTCAGAAACTTCTGCAGTAGCAGCTCAGTGTCTAGTGGACCTATTCGTCAGTTTCTTCAATGTAGTGAGGTCTCAACTGCTTGCTGTGGTATCAATACTGACTGGTTTCATAAAAAGTCCTGTTCAGGCTCCTGCTAGCACTGGGGTCACTGCATTGGTGCGGTTGGCAGATGATTTGAGCAGCAGACTGTCTGAAGATGAATGGAAAGCTATATTTATTGCTCTGAAAGAAGTGACTGCTTCCACTTTGCCAAGATTTTCAAAGGTTATCACAATCATGGACGACATGGAGGTGCCTGAGGTTTCTCAAGCTTCTCCAGATCTTGAAATGCTTTCTGATAATGGATTGACCAATGATGATATTGGGGATGACACTCTGCAAACAGCAGCTTATGTGGTTTCAAGAATGAAGAGTCATATAGCTATGCAACTACTCATTATACAGGTTGCAACTGATATATACAAAATTTGCAGACAGGCCTTTTTGGCATCCATCATAACAATACTTACTGAAACATTTTCCATGATTGCATCTCATGCTCACCAACTGAACTCTGAAAAAATGCTACTGATGAAGCTGCAGAAAGCATGCTCTATCTTGGAGATCTCTGAACCGCCTGTGGTTCACTTTGAAAATGAGTCCTATCAAAATTACCTCAACTTCCTGCAGCATTTGGTCATGGACAATCCATCCGTGGCCGAGGAGCTAAACATAGAACAACAACTAGTGGGAGTATGTGAAAAAATACTGCAGATATACCTGAACTGTGCCGGGTTACAAAATGCCCCACAAAAACAATCGAGCCAGCCAGTGCTGCACTGGATTCTTCCATTGGGTTCAGCACAAAAAGATGAATTGGCTGCTAGGACTTCTCTTGCAGTGTCAGCATTGCAGGTACTGGGTGGTTTGGGAACGGATTCGTTTAGGAAGTACATTTCACAATTCTTCCCTCTGTTAGTAGACCTTGTGCGAAGCGAGCATAGCTCAGGAGACATTCAACGTGTCCTAAGCTACATGTTCCAATCATGTATAGGTCCGATCATAATGAAATTGTGA 3837 0.4188 MLQTYLKDICRTVNGLLKTALGPPPGSTTTLSPIQDLTFRLESVKCLVSIIKSMGAWMDQQLIIGDFSPPKSSESEISTENHAIINGEEGTIPDYELHPETNSGLSDAAAFEQRRAYKLEFQKGISLFNRKPSKGIEFLISSKKIGGSPEEVAAFLKNTAGLNETVIGDYLGEREDFSLKVMHAYVDSFNFEALDFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPNSFTSADTAYVLAYSVILLNTDAHNNMVKDKMTKADFIRNNRGIDDGKDLPEEYLGAIYDHIVKNEIKMNADSSAPQSKQANGFNKLLGLDGIFNLVNWKQTEEKPLGANGLLIKHIQEQFKAKSGKSESVYYAVTDVAILRFMVEVCWGPMLAAFSVTLDQSDDKVATSQCLQGIRHAVHVTAVMGMQTQRDAFVTTVAKFTFLHCVADMKQKNVDAVKAIIAIAIEDGNFLQEAWEHILTCLSRFEHLQLLGEGAPPDASFFTTSNIETDEKTHKSAGFPSLKRRGTLQNPAVVAVVRGGSYDSTTLGVNTSNLVTPEQMNNFILNLHLLDQIGSFELNHIFAHSQRLNSEAIVAFVKALCKVSMSELQSPTDPRVFSLTKIVEIAHYNMNRIRLVWSRIWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSNSTEIKELIVRCISQMVLSRVNNVKSGWKSVFMVFTAAAADERKNIVLLAFETMEKIVREYFPYITETETTTFTDCVRCLITFTNSRFNSDVSLNAIAFLRFCAVKLAEGGLVCNERSEEGDSSTPPVDKDASDGQLFTDRDDHASYWIPLLTGLSKLTSDPRSAIRKSSLEVLFNILKDHGHLFSRTFWAGVFSLVVFPIFNFVSDKGGTDANNDQVLQASRPPHPDVGTWDSETSAVAAQCLVDLFVSFFNVVRSQLLAVVSILTGFIKSPVQAPASTGVTALVRLADDLSSRLSEDEWKAIFIALKEVTASTLPRFSKVITIMDDMEVPEVSQASPDLEMLSDNGLTNDDIGDDTLQTAAYVVSRMKSHIAMQLLIIQVATDIYKICRQAFLASIITILTETFSMIASHAHQLNSEKMLLMKLQKACSILEISEPPVVHFENESYQNYLNFLQHLVMDNPSVAEELNIEQQLVGVCEKILQIYLNCAGLQNAPQKQSSQPVLHWILPLGSAQKDELAARTSLAVSALQVLGGLGTDSFRKYISQFFPLLVDLVRSEHSSGDIQRVLSYMFQSCIGPIIMKL* 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0359 1278 Gene3D - 192 311 IPR023394 -
Vvi3g0359 1278 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 102 190 - -
Vvi3g0359 1278 ProSiteProfiles SEC7 domain profile. 110 297 IPR000904 GO:0005085|GO:0032012
Vvi3g0359 1278 CDD Sec7 117 299 IPR000904 GO:0005085|GO:0032012
Vvi3g0359 1278 Pfam BIG2 C-terminal domain 1069 1267 IPR046455 -
Vvi3g0359 1278 SMART sec7_5 114 299 IPR000904 GO:0005085|GO:0032012
Vvi3g0359 1278 MobiDBLite consensus disorder prediction 810 829 - -
Vvi3g0359 1278 Gene3D - 103 191 - -
Vvi3g0359 1278 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 192 310 - -
Vvi3g0359 1278 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1142 - -
Vvi3g0359 1278 Pfam Domain of unknown function (DUF1981) 667 749 IPR015403 -
Vvi3g0359 1278 SUPERFAMILY ARM repeat 598 1251 IPR016024 -
Vvi3g0359 1278 Gene3D - 656 880 IPR011989 -
Vvi3g0359 1278 Pfam C-terminal region of Mon2 protein 840 912 IPR032817 -
Vvi3g0359 1278 Pfam Sec7 domain 118 299 IPR000904 GO:0005085|GO:0032012
Vvi3g0359 1278 SUPERFAMILY Sec7 domain 114 305 IPR035999 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0359 Vvi-Chr3 2947408 2962358 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0359 K18442 - vvi:100250471 2447.54