Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0357 ATGATATTGACCCGACCCGGCCCAACGTGTCGAGTAATAGCGGAGACAGAGTGGACTCGCCACTGCAACTCAGCGGAAATGAGTCATTGTACGCTCTGGAGCTCTCCATCCAGAACCAGAACCCTAGAATTGAAGGGAAATGGAGGATATAGGACTGTAGAGAGGGTGAAGAGAGGGATTTTCACTATAAATATGAGAGACAGAAGTCAGAATCGGAAGCCATTGCAGAGAGGGAGGAATCTGAGCATCGAAGCGATTCAGGCAGTGCAGGCACTGAAGCGCGCTAAGAGAGATGAGTCGTCGCTGGAGAGAGTGTTTGAGTCGAAGGTCCGGCGTTTGTTGAAGCTTGATATGATCGCCGTTCTTAAGCAACTTCTGAACCAGAACGAATGCCTTCTGGCCCTAAAGGTTTTTGATGATGTTCGGAAGGAGTATTGGTATAAGCCTCAAGTTTCACTCTATGCCGAAATGATTAGGGTGCTGGGTAGCAATGGGTTGTTTGAACAGGTTCACCTTCTCCTCTCTTACTTGAAAAAGGAAACTGGTCTAGAGCTTGAAACTGAGGGCTTTAATGCTCTGTTGAGGACTTTGATTGATTTCGACATGACTGGGCCTGCAATGGAGTGTTTTCAGTTGATGAAAACATCTGGATGTGAACCCAATAAGTCCTCCTTCAGAATACTGATAAAGGGTTTAGAATCAAAGGGAGAATTGGATATTTCAGCCACTGTAAAGCTGGATGCTCAAAAATATTTTGGTGAATCACTGGAGTTTCTAGAGGAGGAGGAAGACATGACAGTGGGCTACAACTATAACTGA 819 0.4567 MILTRPGPTCRVIAETEWTRHCNSAEMSHCTLWSSPSRTRTLELKGNGGYRTVERVKRGIFTINMRDRSQNRKPLQRGRNLSIEAIQAVQALKRAKRDESSLERVFESKVRRLLKLDMIAVLKQLLNQNECLLALKVFDDVRKEYWYKPQVSLYAEMIRVLGSNGLFEQVHLLLSYLKKETGLELETEGFNALLRTLIDFDMTGPAMECFQLMKTSGCEPNKSSFRILIKGLESKGELDISATVKLDAQKYFGESLEFLEEEEDMTVGYNYN* 273
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0357 272 Pfam PPR repeat family 189 232 IPR002885 -
Vvi3g0357 272 Gene3D Tetratricopeptide repeat domain 80 251 IPR011990 GO:0005515
Vvi3g0357 272 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 42 263 IPR044190 GO:0000373|GO:0003723|GO:0009658
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g0357 Vvi-Chr3 2936429 2937498 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0357 - - vvi:100255649 523.087